PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

5408
Candidate Protein Records
4737
Pathway-Level Records
12960
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
ocimum_basilicum_452.g74.t1 Terpenoid MVK low borderline
ocimum_basilicum_517.g59.t1 Terpenoid MVK low borderline
ocimum_basilicum_518.g70.t1 Terpenoid MVK low borderline
ocimum_basilicum_570307.g3.t1 Terpenoid MVK medium pass
ocimum_basilicum_570308.g3.t1 Terpenoid MVK medium pass
ocimum_basilicum_663.g22.t1 Terpenoid MVK medium pass
ocimum_basilicum_717.g35.t1 Terpenoid MVK low borderline
ocimum_basilicum_805.g30.t1 Terpenoid MVK low borderline
ocimum_basilicum_382166.g4.t1 Terpenoid PMK medium pass
ocimum_basilicum_382417.g2.t1 Terpenoid PMK medium pass
ocimum_basilicum_751.g126.t1 Terpenoid PMK medium pass
ocimum_basilicum_1032.g13.t1 Terpenoid TPS medium pass
ocimum_basilicum_1032.g14.t1 Terpenoid TPS medium pass
ocimum_basilicum_1032.g24.t1 Terpenoid TPS medium pass
ocimum_basilicum_1032.g29.t1 Terpenoid TPS medium pass
ocimum_basilicum_1032.g30.t1 Terpenoid TPS medium pass
ocimum_basilicum_1032.g36.t1 Terpenoid TPS low borderline
ocimum_basilicum_1032.g37.t1 Terpenoid TPS medium pass
ocimum_basilicum_1032.g38.t1 Terpenoid TPS medium pass
ocimum_basilicum_1062.g27.t1 Terpenoid TPS medium pass
ocimum_basilicum_1072.g1.t1 Terpenoid TPS medium pass
ocimum_basilicum_1175.g12.t1 Terpenoid TPS medium pass
ocimum_basilicum_1204.g3.t1 Terpenoid TPS medium pass
ocimum_basilicum_1209.g7.t1 Terpenoid TPS medium pass
ocimum_basilicum_1222.g1.t1 Terpenoid TPS medium pass
ocimum_basilicum_1231.g1.t1 Terpenoid TPS medium pass
ocimum_basilicum_1231.g2.t1 Terpenoid TPS medium pass
ocimum_basilicum_1231.g4.t1 Terpenoid TPS medium pass
ocimum_basilicum_1242.g52.t1 Terpenoid TPS medium pass
ocimum_basilicum_1298.g2.t1 Terpenoid TPS medium pass
ocimum_basilicum_1298.g3.t1 Terpenoid TPS medium pass
ocimum_basilicum_1437.g14.t1 Terpenoid TPS medium pass
ocimum_basilicum_1437.g18.t1 Terpenoid TPS medium pass
ocimum_basilicum_1437.g19.t1 Terpenoid TPS medium pass
ocimum_basilicum_1513.g10.t1 Terpenoid TPS medium pass
ocimum_basilicum_1513.g12.t1 Terpenoid TPS medium pass
ocimum_basilicum_1513.g13.t1 Terpenoid TPS medium pass
ocimum_basilicum_1521.g15.t1 Terpenoid TPS medium pass
ocimum_basilicum_1521.g16.t1 Terpenoid TPS medium pass
ocimum_basilicum_1521.g18.t1 Terpenoid TPS medium pass
ocimum_basilicum_1574.g24.t1 Terpenoid TPS medium pass
ocimum_basilicum_1574.g25.t1 Terpenoid TPS medium pass
ocimum_basilicum_1574.g26.t1 Terpenoid TPS medium pass
ocimum_basilicum_1574.g27.t1 Terpenoid TPS medium pass
ocimum_basilicum_1574.g28.t1 Terpenoid TPS medium pass
ocimum_basilicum_1574.g29.t1 Terpenoid TPS medium pass
ocimum_basilicum_1574.g30.t1 Terpenoid TPS medium pass
ocimum_basilicum_1574.g31.t1 Terpenoid TPS medium pass
ocimum_basilicum_1574.g32.t1 Terpenoid TPS medium pass
ocimum_basilicum_1574.g33.t1 Terpenoid TPS medium pass