PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
ocimum_basilicum_348289.g3.t1 Flavonoid ANS/LDOX medium borderline
ocimum_basilicum_349785.g1.t1 Flavonoid ANS/LDOX medium pass
ocimum_basilicum_370351.g1.t1 Flavonoid ANS/LDOX medium borderline
ocimum_basilicum_370703.g1.t1 Flavonoid ANS/LDOX medium pass
ocimum_basilicum_372411.g10.t1 Flavonoid ANS/LDOX medium borderline
ocimum_basilicum_382403.g32.t1 Flavonoid ANS/LDOX medium borderline
ocimum_basilicum_382938.g82.t1 Flavonoid ANS/LDOX low borderline
ocimum_basilicum_383905.g29.t1 Flavonoid ANS/LDOX medium borderline
ocimum_basilicum_385637.g33.t1 Flavonoid ANS/LDOX medium borderline
ocimum_basilicum_452.g5.t1 Flavonoid ANS/LDOX medium borderline
ocimum_basilicum_514.g27.t1 Flavonoid ANS/LDOX medium borderline
ocimum_basilicum_542.g18.t1 Flavonoid ANS/LDOX medium pass
ocimum_basilicum_553.g42.t1 Flavonoid ANS/LDOX medium borderline
ocimum_basilicum_660.g79.t1 Flavonoid ANS/LDOX medium borderline
ocimum_basilicum_1276.g37.t1 Flavonoid C4H medium borderline
ocimum_basilicum_1276.g38.t1 Flavonoid C4H medium borderline
ocimum_basilicum_1532.g3.t1 Flavonoid C4H low borderline
ocimum_basilicum_1593.g21.t1 Flavonoid C4H low borderline
ocimum_basilicum_1721.g7.t1 Flavonoid C4H low borderline
ocimum_basilicum_1822.g13.t1 Flavonoid C4H medium borderline
ocimum_basilicum_1834.g9.t1 Flavonoid C4H medium borderline
ocimum_basilicum_1949.g120.t1 Flavonoid C4H low borderline
ocimum_basilicum_1950.g53.t1 Flavonoid C4H medium borderline
ocimum_basilicum_1964.g95.t1 Flavonoid C4H low borderline
ocimum_basilicum_364722.g4.t1 Flavonoid C4H medium borderline
ocimum_basilicum_376503.g2.t1 Flavonoid C4H low borderline
ocimum_basilicum_377364.g7.t1 Flavonoid C4H low borderline
ocimum_basilicum_377399.g1.t1 Flavonoid C4H medium pass
ocimum_basilicum_377399.g2.t1 Flavonoid C4H medium borderline
ocimum_basilicum_379021.g10.t1 Flavonoid C4H medium borderline
ocimum_basilicum_379021.g5.t1 Flavonoid C4H low borderline
ocimum_basilicum_381364.g8.t1 Flavonoid C4H medium pass
ocimum_basilicum_382181.g70.t1 Flavonoid C4H low borderline
ocimum_basilicum_382614.g13.t1 Flavonoid C4H low borderline
ocimum_basilicum_382614.g7.t1 Flavonoid C4H low borderline
ocimum_basilicum_383013.g47.t1 Flavonoid C4H low borderline
ocimum_basilicum_383639.g13.t1 Flavonoid C4H low borderline
ocimum_basilicum_383641.g7.t1 Flavonoid C4H low borderline
ocimum_basilicum_383772.g86.t1 Flavonoid C4H low borderline
ocimum_basilicum_384278.g5.t1 Flavonoid C4H low borderline
ocimum_basilicum_384868.g31.t1 Flavonoid C4H medium borderline
ocimum_basilicum_384868.g32.t1 Flavonoid C4H medium borderline
ocimum_basilicum_384868.g33.t1 Flavonoid C4H medium borderline
ocimum_basilicum_384868.g34.t1 Flavonoid C4H medium borderline
ocimum_basilicum_385220.g5.t1 Flavonoid C4H low borderline
ocimum_basilicum_386138.g1.t1 Flavonoid C4H low borderline
ocimum_basilicum_388324.g1.t1 Flavonoid C4H low borderline
ocimum_basilicum_388325.g1.t1 Flavonoid C4H low borderline
ocimum_basilicum_451.g150.t1 Flavonoid C4H low borderline
ocimum_basilicum_516.g129.t1 Flavonoid C4H medium borderline