PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
ocimum_basilicum_516.g97.t1 Flavonoid C4H low borderline
ocimum_basilicum_545.g88.t1 Flavonoid C4H medium borderline
ocimum_basilicum_570426.g1.t1 Flavonoid C4H low borderline
ocimum_basilicum_691.g37.t1 Flavonoid C4H low borderline
ocimum_basilicum_710.g82.t1 Flavonoid C4H medium borderline
ocimum_basilicum_716.g49.t1 Flavonoid C4H medium borderline
ocimum_basilicum_755.g46.t1 Flavonoid C4H low borderline
ocimum_basilicum_1256.g38.t1 Flavonoid CHI medium pass
ocimum_basilicum_1290.g18.t1 Flavonoid CHI medium pass
ocimum_basilicum_1325.g35.t1 Flavonoid CHI medium pass
ocimum_basilicum_385469.g12.t1 Flavonoid CHI medium pass
ocimum_basilicum_385628.g23.t1 Flavonoid CHI medium pass
ocimum_basilicum_454.g32.t1 Flavonoid CHI medium pass
ocimum_basilicum_487.g31.t1 Flavonoid CHI low borderline
ocimum_basilicum_516.g36.t1 Flavonoid CHI low borderline
ocimum_basilicum_1167.g1.t1 Flavonoid CHS medium pass
ocimum_basilicum_1568.g59.t1 Flavonoid CHS medium pass
ocimum_basilicum_1830.g16.t1 Flavonoid CHS medium pass
ocimum_basilicum_366720.g4.t1 Flavonoid CHS low borderline
ocimum_basilicum_371.g46.t1 Flavonoid CHS low borderline
ocimum_basilicum_371576.g1.t1 Flavonoid CHS medium pass
ocimum_basilicum_379969.g33.t1 Flavonoid CHS medium pass
ocimum_basilicum_379969.g35.t1 Flavonoid CHS medium pass
ocimum_basilicum_382557.g17.t1 Flavonoid CHS medium pass
ocimum_basilicum_382957.g26.t1 Flavonoid CHS low borderline
ocimum_basilicum_383121.g14.t1 Flavonoid CHS medium pass
ocimum_basilicum_383788.g132.t1 Flavonoid CHS low borderline
ocimum_basilicum_384222.g87.t1 Flavonoid CHS low borderline
ocimum_basilicum_384886.g6.t1 Flavonoid CHS medium pass
ocimum_basilicum_385172.g5.t1 Flavonoid CHS medium pass
ocimum_basilicum_385524.g44.t1 Flavonoid CHS medium pass
ocimum_basilicum_385708.g14.t1 Flavonoid CHS medium pass
ocimum_basilicum_454.g110.t1 Flavonoid CHS medium pass
ocimum_basilicum_486.g66.t1 Flavonoid CHS medium pass
ocimum_basilicum_506.g16.t1 Flavonoid CHS medium pass
ocimum_basilicum_506.g7.t1 Flavonoid CHS medium pass
ocimum_basilicum_666.g13.t1 Flavonoid CHS medium pass
ocimum_basilicum_715.g29.t1 Flavonoid CHS medium pass
ocimum_basilicum_731.g33.t1 Flavonoid CHS low borderline
ocimum_basilicum_973.g23.t1 Flavonoid CHS low borderline
ocimum_basilicum_1722.g4.t1 Flavonoid DFR medium borderline
ocimum_basilicum_1845.g65.t1 Flavonoid DFR medium pass
ocimum_basilicum_1855.g2.t1 Flavonoid DFR medium borderline
ocimum_basilicum_1886.g78.t1 Flavonoid DFR medium borderline
ocimum_basilicum_1886.g85.t1 Flavonoid DFR medium borderline
ocimum_basilicum_1979.g146.t1 Flavonoid DFR medium borderline
ocimum_basilicum_359235.g1.t1 Flavonoid DFR medium borderline
ocimum_basilicum_361577.g6.t1 Flavonoid DFR medium pass
ocimum_basilicum_370213.g1.t1 Flavonoid DFR medium borderline
ocimum_basilicum_382151.g18.t1 Flavonoid DFR medium borderline