PlantSME Plant secondary metabolism enzyme database

Oryza sativa (oryza_sativa)

Imported from atlas release summary for Oryza sativa.

2290
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 638 19 BAHD (236) View species results
Alkaloid pathway 531 24 7DLGT (95) View species results
Phenylpropanoid pathway 462 11 POD (239) View species results
Flavonoid pathway 317 11 UFGT (201) View species results
Steroid pathway 180 13 SMT1/SMT2/SMT3 (78) View species results
Rosmarinic acid pathway 162 7 C4H (77) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2120 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 417 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
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Gene Pathway Family Confidence Status
Osat05G0022080.1 Steroid BR6OX2/CYP85A2 low borderline
Osat05G0025510.1 Steroid BR6OX2/CYP85A2 low borderline
Osat05G0025510.2 Steroid BR6OX2/CYP85A2 low borderline
Osat06G0002210.1 Steroid BR6OX2/CYP85A2 low borderline
Osat06G0015630.1 Steroid BR6OX2/CYP85A2 low borderline
Osat06G0015790.1 Steroid BR6OX2/CYP85A2 low borderline
Osat06G0017050.1 Steroid BR6OX2/CYP85A2 low borderline
Osat06G0017880.1 Steroid BR6OX2/CYP85A2 low borderline
Osat06G0019440.1 Steroid BR6OX2/CYP85A2 low borderline
Osat06G0019660.1 Steroid BR6OX2/CYP85A2 low borderline
Osat06G0019760.1 Steroid BR6OX2/CYP85A2 low borderline
Osat06G0023390.1 Steroid BR6OX2/CYP85A2 low borderline
Osat06G0023630.1 Steroid BR6OX2/CYP85A2 low borderline
Osat06G0025370.1 Steroid BR6OX2/CYP85A2 low borderline
Osat06G0025450.1 Steroid BR6OX2/CYP85A2 low borderline
Osat06G0026410.1 Steroid BR6OX2/CYP85A2 low borderline
Osat06G0028020.1 Steroid BR6OX2/CYP85A2 low borderline
Osat06G0028030.1 Steroid BR6OX2/CYP85A2 low borderline
Osat06G0028100.1 Steroid BR6OX2/CYP85A2 low borderline
Osat06G0028140.1 Steroid BR6OX2/CYP85A2 low borderline
Osat06G0028150.1 Steroid BR6OX2/CYP85A2 low borderline
Osat06G0028180.1 Steroid BR6OX2/CYP85A2 low borderline
Osat07G0008650.1 Steroid BR6OX2/CYP85A2 low borderline
Osat07G0008700.1 Steroid BR6OX2/CYP85A2 medium borderline
Osat07G0012830.1 Steroid BR6OX2/CYP85A2 low borderline
Osat07G0015830.1 Steroid BR6OX2/CYP85A2 low borderline
Osat07G0023600.1 Steroid BR6OX2/CYP85A2 low borderline
Osat07G0029430.1 Steroid BR6OX2/CYP85A2 low borderline
Osat08G0000410.1 Steroid BR6OX2/CYP85A2 low borderline
Osat08G0000430.1 Steroid BR6OX2/CYP85A2 low borderline
Osat08G0000460.1 Steroid BR6OX2/CYP85A2 low borderline
Osat08G0000480.1 Steroid BR6OX2/CYP85A2 low borderline
Osat08G0002310.1 Steroid BR6OX2/CYP85A2 low borderline
Osat08G0003690.1 Steroid BR6OX2/CYP85A2 low borderline
Osat08G0003700.1 Steroid BR6OX2/CYP85A2 low borderline
Osat08G0010770.1 Steroid BR6OX2/CYP85A2 low borderline
Osat08G0010890.1 Steroid BR6OX2/CYP85A2 low borderline
Osat08G0022570.1 Steroid BR6OX2/CYP85A2 low borderline
Osat08G0025420.1 Steroid BR6OX2/CYP85A2 low borderline
Osat08G0025430.1 Steroid BR6OX2/CYP85A2 low borderline
Osat08G0025450.1 Steroid BR6OX2/CYP85A2 low borderline
Osat08G0025450.2 Steroid BR6OX2/CYP85A2 low borderline
Osat08G0025450.3 Steroid BR6OX2/CYP85A2 low borderline
Osat08G0025460.1 Steroid BR6OX2/CYP85A2 low borderline
Osat08G0028530.1 Steroid BR6OX2/CYP85A2 low borderline
Osat09G0003580.1 Steroid BR6OX2/CYP85A2 low borderline
Osat09G0004280.1 Steroid BR6OX2/CYP85A2 low borderline
Osat09G0014980.1 Steroid BR6OX2/CYP85A2 low borderline
Osat09G0015000.1 Steroid BR6OX2/CYP85A2 low borderline
Osat09G0015010.1 Steroid BR6OX2/CYP85A2 low borderline