PlantSME Plant secondary metabolism enzyme database

Oryza sativa (oryza_sativa)

Imported from atlas release summary for Oryza sativa.

2290
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 638 19 BAHD (236) View species results
Alkaloid pathway 531 24 7DLGT (95) View species results
Phenylpropanoid pathway 462 11 POD (239) View species results
Flavonoid pathway 317 11 UFGT (201) View species results
Steroid pathway 180 13 SMT1/SMT2/SMT3 (78) View species results
Rosmarinic acid pathway 162 7 C4H (77) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2120 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 417 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Gene Pathway Family Confidence Status
Osat01G0006470.1 Terpenoid CYP76 low borderline
Osat01G0009730.1 Terpenoid CYP76 medium borderline
Osat01G0017590.1 Terpenoid CYP76 low borderline
Osat01G0023060.1 Terpenoid CYP76 medium borderline
Osat01G0023090.1 Terpenoid CYP76 medium pass
Osat01G0024220.1 Terpenoid CYP76 medium pass
Osat01G0033400.1 Terpenoid CYP76 medium borderline
Osat01G0033430.1 Terpenoid CYP76 low borderline
Osat01G0033460.1 Terpenoid CYP76 low borderline
Osat01G0033470.1 Terpenoid CYP76 low borderline
Osat01G0041870.1 Terpenoid CYP76 low borderline
Osat02G0000740.1 Terpenoid CYP76 medium pass
Osat02G0000840.1 Terpenoid CYP76 low borderline
Osat02G0006880.1 Terpenoid CYP76 medium pass
Osat02G0009270.1 Terpenoid CYP76 medium pass
Osat02G0009410.1 Terpenoid CYP76 low borderline
Osat02G0009620.1 Terpenoid CYP76 low borderline
Osat02G0009620.2 Terpenoid CYP76 medium pass
Osat02G0013270.1 Terpenoid CYP76 medium borderline
Osat02G0016030.1 Terpenoid CYP76 low borderline
Osat02G0018250.1 Terpenoid CYP76 medium pass
Osat02G0018290.1 Terpenoid CYP76 medium pass
Osat02G0020240.1 Terpenoid CYP76 medium pass
Osat02G0020340.1 Terpenoid CYP76 medium borderline
Osat02G0020410.1 Terpenoid CYP76 medium pass
Osat02G0020420.1 Terpenoid CYP76 medium pass
Osat02G0020430.1 Terpenoid CYP76 medium pass
Osat02G0020440.1 Terpenoid CYP76 medium pass
Osat02G0024550.1 Terpenoid CYP76 medium borderline
Osat02G0024570.1 Terpenoid CYP76 medium borderline
Osat02G0024590.1 Terpenoid CYP76 medium borderline
Osat02G0024700.1 Terpenoid CYP76 medium borderline
Osat02G0026730.1 Terpenoid CYP76 low borderline
Osat03G0001060.1 Terpenoid CYP76 medium borderline
Osat03G0002770.1 Terpenoid CYP76 medium pass
Osat03G0011240.1 Terpenoid CYP76 medium borderline
Osat03G0011250.1 Terpenoid CYP76 medium borderline
Osat03G0011370.1 Terpenoid CYP76 medium pass
Osat03G0019610.1 Terpenoid CYP76 medium borderline
Osat03G0023040.1 Terpenoid CYP76 medium pass
Osat03G0025650.1 Terpenoid CYP76 medium pass
Osat03G0027820.1 Terpenoid CYP76 medium pass
Osat03G0030570.1 Terpenoid CYP76 medium borderline
Osat03G0038500.1 Terpenoid CYP76 medium pass
Osat03G0038510.1 Terpenoid CYP76 low borderline
Osat03G0038520.1 Terpenoid CYP76 medium pass
Osat04G0000040.1 Terpenoid CYP76 medium borderline
Osat04G0000040.2 Terpenoid CYP76 low borderline
Osat04G0001650.1 Terpenoid CYP76 low borderline
Osat04G0001670.1 Terpenoid CYP76 low borderline