PlantSME Plant secondary metabolism enzyme database

Oryza sativa (oryza_sativa)

Imported from atlas release summary for Oryza sativa.

2290
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 638 19 BAHD (236) View species results
Alkaloid pathway 531 24 7DLGT (95) View species results
Phenylpropanoid pathway 462 11 POD (239) View species results
Flavonoid pathway 317 11 UFGT (201) View species results
Steroid pathway 180 13 SMT1/SMT2/SMT3 (78) View species results
Rosmarinic acid pathway 162 7 C4H (77) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2120 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 417 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
Osat01G0008500.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0008510.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0008530.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0009740.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0017570.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0023060.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0023090.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0026910.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0026920.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0026930.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0028520.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0028520.2 Steroid DWF4/CYP90B1 low borderline
Osat01G0028530.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0028550.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0028560.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0028580.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0028590.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0028600.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0033430.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0035410.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0040620.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0040630.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0040690.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0044620.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0044620.2 Steroid DWF4/CYP90B1 low borderline
Osat01G0051380.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0051810.1 Steroid DWF4/CYP90B1 low borderline
Osat02G0005760.1 Steroid DWF4/CYP90B1 low borderline
Osat02G0005760.2 Steroid DWF4/CYP90B1 low borderline
Osat02G0005760.3 Steroid DWF4/CYP90B1 low borderline
Osat02G0005760.4 Steroid DWF4/CYP90B1 low borderline
Osat02G0005760.5 Steroid DWF4/CYP90B1 low borderline
Osat02G0006740.1 Steroid DWF4/CYP90B1 low borderline
Osat02G0006860.1 Steroid DWF4/CYP90B1 low borderline
Osat02G0006920.1 Steroid DWF4/CYP90B1 low borderline
Osat02G0008400.1 Steroid DWF4/CYP90B1 medium borderline
Osat02G0020240.1 Steroid DWF4/CYP90B1 low borderline
Osat02G0020410.1 Steroid DWF4/CYP90B1 low borderline
Osat02G0020420.1 Steroid DWF4/CYP90B1 low borderline
Osat02G0020430.1 Steroid DWF4/CYP90B1 low borderline
Osat02G0020440.1 Steroid DWF4/CYP90B1 low borderline
Osat02G0033750.1 Steroid DWF4/CYP90B1 medium borderline
Osat02G0042340.1 Steroid DWF4/CYP90B1 low borderline
Osat02G0042340.2 Steroid DWF4/CYP90B1 low borderline
Osat02G0042340.3 Steroid DWF4/CYP90B1 low borderline
Osat02G0042340.4 Steroid DWF4/CYP90B1 low borderline
Osat02G0042860.1 Steroid DWF4/CYP90B1 low borderline
Osat03G0003190.1 Steroid DWF4/CYP90B1 low borderline
Osat03G0003210.1 Steroid DWF4/CYP90B1 low borderline
Osat03G0003220.1 Steroid DWF4/CYP90B1 low borderline