PlantSME Plant secondary metabolism enzyme database

Oryza sativa (oryza_sativa)

Imported from atlas release summary for Oryza sativa.

2290
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 638 19 BAHD (236) View species results
Alkaloid pathway 531 24 7DLGT (95) View species results
Phenylpropanoid pathway 462 11 POD (239) View species results
Flavonoid pathway 317 11 UFGT (201) View species results
Steroid pathway 180 13 SMT1/SMT2/SMT3 (78) View species results
Rosmarinic acid pathway 162 7 C4H (77) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2120 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 417 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status
Osat01G0023090.2 Alkaloid G8O/G8H medium pass
Osat01G0023090.3 Alkaloid G8O/G8H medium pass
Osat01G0024220.1 Alkaloid G8O/G8H medium borderline
Osat02G0000740.1 Alkaloid G8O/G8H medium borderline
Osat02G0006810.1 Alkaloid G8O/G8H medium borderline
Osat02G0006810.2 Alkaloid G8O/G8H medium borderline
Osat02G0006880.1 Alkaloid G8O/G8H medium borderline
Osat02G0009270.1 Alkaloid G8O/G8H medium borderline
Osat02G0009410.1 Alkaloid G8O/G8H low borderline
Osat02G0013270.1 Alkaloid G8O/G8H medium borderline
Osat03G0002770.1 Alkaloid G8O/G8H medium borderline
Osat03G0011370.1 Alkaloid G8O/G8H medium borderline
Osat03G0027820.1 Alkaloid G8O/G8H medium borderline
Osat03G0037090.1 Alkaloid G8O/G8H medium pass
Osat03G0038510.1 Alkaloid G8O/G8H low borderline
Osat03G0038520.1 Alkaloid G8O/G8H medium borderline
Osat04G0000040.2 Alkaloid G8O/G8H low borderline
Osat04G0001670.1 Alkaloid G8O/G8H medium borderline
Osat04G0026020.1 Alkaloid G8O/G8H low borderline
Osat06G0013790.1 Alkaloid G8O/G8H medium borderline
Osat06G0015790.1 Alkaloid G8O/G8H medium borderline
Osat06G0017050.1 Alkaloid G8O/G8H medium borderline
Osat06G0022100.1 Alkaloid G8O/G8H low borderline
Osat06G0023650.1 Alkaloid G8O/G8H medium borderline
Osat06G0023660.1 Alkaloid G8O/G8H medium borderline
Osat06G0023660.2 Alkaloid G8O/G8H medium borderline
Osat06G0023660.3 Alkaloid G8O/G8H medium borderline
Osat06G0027500.1 Alkaloid G8O/G8H medium borderline
Osat06G0028170.1 Alkaloid G8O/G8H medium borderline
Osat06G0028170.2 Alkaloid G8O/G8H medium borderline
Osat06G0028170.3 Alkaloid G8O/G8H medium borderline
Osat07G0015830.1 Alkaloid G8O/G8H medium borderline
Osat07G0016610.1 Alkaloid G8O/G8H low borderline
Osat07G0018320.1 Alkaloid G8O/G8H low borderline
Osat07G0026330.1 Alkaloid G8O/G8H medium borderline
Osat08G0003700.1 Alkaloid G8O/G8H medium borderline
Osat08G0022570.1 Alkaloid G8O/G8H medium borderline
Osat08G0025450.2 Alkaloid G8O/G8H low borderline
Osat09G0021080.1 Alkaloid G8O/G8H medium borderline
Osat09G0021510.1 Alkaloid G8O/G8H low borderline
Osat10G0002570.1 Alkaloid G8O/G8H medium borderline
Osat10G0002870.1 Alkaloid G8O/G8H medium borderline
Osat10G0004350.1 Alkaloid G8O/G8H low borderline
Osat10G0004830.1 Alkaloid G8O/G8H medium borderline
Osat10G0004830.2 Alkaloid G8O/G8H medium pass
Osat10G0006210.1 Alkaloid G8O/G8H medium borderline
Osat10G0006210.2 Alkaloid G8O/G8H medium borderline
Osat10G0009150.1 Alkaloid G8O/G8H medium pass
Osat10G0020090.1 Alkaloid G8O/G8H medium borderline
Osat10G0020150.1 Alkaloid G8O/G8H medium borderline