PlantSME Plant secondary metabolism enzyme database

Oryza sativa (oryza_sativa)

Imported from atlas release summary for Oryza sativa.

2741
Candidate Protein Records
2290
Pathway-Level Records
5669
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 638 19 BAHD (236) View species results
Alkaloid pathway 531 24 7DLGT (95) View species results
Phenylpropanoid pathway 462 11 POD (239) View species results
Flavonoid pathway 317 11 UFGT (201) View species results
Steroid pathway 180 13 SMT1/SMT2/SMT3 (78) View species results
Rosmarinic acid pathway 162 7 C4H (77) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2120 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 417 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Protein/Isoform Record Pathway Family Confidence Status
Osat01G0016450.1 Alkaloid H6H low borderline
Osat01G0036470.1 Alkaloid H6H low borderline
Osat01G0042620.1 Alkaloid H6H low borderline
Osat01G0042770.1 Alkaloid H6H medium borderline
Osat01G0042770.2 Alkaloid H6H medium borderline
Osat01G0042770.3 Alkaloid H6H medium borderline
Osat01G0042770.4 Alkaloid H6H medium borderline
Osat01G0046510.1 Alkaloid H6H high pass
Osat01G0050250.1 Alkaloid H6H medium borderline
Osat02G0038760.1 Alkaloid H6H medium borderline
Osat02G0038760.2 Alkaloid H6H medium borderline
Osat02G0038760.3 Alkaloid H6H medium borderline
Osat03G0001790.4 Alkaloid H6H low borderline
Osat03G0001790.5 Alkaloid H6H low borderline
Osat03G0024360.1 Alkaloid H6H medium borderline
Osat03G0033430.1 Alkaloid H6H medium borderline
Osat03G0045890.1 Alkaloid H6H medium borderline
Osat04G0004530.1 Alkaloid H6H medium borderline
Osat04G0016660.1 Alkaloid H6H low borderline
Osat04G0035000.1 Alkaloid H6H high pass
Osat05G0003800.1 Alkaloid H6H low borderline
Osat05G0008040.1 Alkaloid H6H low borderline
Osat05G0008040.2 Alkaloid H6H low borderline
Osat05G0010960.1 Alkaloid H6H low borderline
Osat05G0020470.2 Alkaloid H6H medium borderline
Osat05G0027060.1 Alkaloid H6H low borderline
Osat05G0031970.1 Alkaloid H6H low borderline
Osat06G0005680.1 Alkaloid H6H low borderline
Osat06G0005690.1 Alkaloid H6H medium borderline
Osat06G0005810.1 Alkaloid H6H medium borderline
Osat07G0000290.1 Alkaloid H6H medium pass
Osat07G0005220.1 Alkaloid H6H medium borderline
Osat07G0005220.2 Alkaloid H6H medium borderline
Osat07G0005230.1 Alkaloid H6H medium pass
Osat08G0017830.1 Alkaloid H6H medium pass
Osat08G0017870.1 Alkaloid H6H low borderline
Osat08G0017900.1 Alkaloid H6H low borderline
Osat08G0019300.1 Alkaloid H6H low borderline
Osat08G0019310.1 Alkaloid H6H low borderline
Osat09G0002470.1 Alkaloid H6H low borderline
Osat09G0002470.2 Alkaloid H6H low borderline
Osat09G0002670.1 Alkaloid H6H low borderline
Osat09G0015680.1 Alkaloid H6H medium borderline
Osat10G0006850.1 Alkaloid H6H low borderline
Osat10G0006850.2 Alkaloid H6H low borderline
Osat10G0006850.3 Alkaloid H6H low borderline
Osat10G0006850.4 Alkaloid H6H low borderline
Osat10G0006850.5 Alkaloid H6H low borderline
Osat10G0006850.6 Alkaloid H6H low borderline
Osat10G0006850.7 Alkaloid H6H low borderline