PlantSME Plant secondary metabolism enzyme database

Oryza sativa (oryza_sativa)

Imported from atlas release summary for Oryza sativa.

2290
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 638 19 BAHD (236) View species results
Alkaloid pathway 531 24 7DLGT (95) View species results
Phenylpropanoid pathway 462 11 POD (239) View species results
Flavonoid pathway 317 11 UFGT (201) View species results
Steroid pathway 180 13 SMT1/SMT2/SMT3 (78) View species results
Rosmarinic acid pathway 162 7 C4H (77) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2120 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 417 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
Osat01G0000850.1 Terpenoid AACT medium borderline
Osat01G0000850.2 Terpenoid AACT medium borderline
Osat02G0007740.1 Terpenoid AACT low borderline
Osat02G0042320.1 Terpenoid AACT medium borderline
Osat09G0002960.1 Terpenoid AACT medium borderline
Osat09G0002960.2 Terpenoid AACT medium borderline
Osat09G0002960.3 Terpenoid AACT medium borderline
Osat10G0016140.1 Terpenoid AACT medium borderline
Osat01G0000430.1 Terpenoid BAHD medium pass
Osat01G0004490.1 Terpenoid BAHD low borderline
Osat01G0004490.2 Terpenoid BAHD low borderline
Osat01G0006090.1 Terpenoid BAHD medium pass
Osat01G0006660.1 Terpenoid BAHD medium pass
Osat01G0008770.1 Terpenoid BAHD low borderline
Osat01G0011490.1 Terpenoid BAHD medium pass
Osat01G0013250.1 Terpenoid BAHD medium pass
Osat01G0013890.1 Terpenoid BAHD low borderline
Osat01G0013970.1 Terpenoid BAHD medium pass
Osat01G0014420.1 Terpenoid BAHD medium pass
Osat01G0015400.1 Terpenoid BAHD medium pass
Osat01G0015400.2 Terpenoid BAHD medium pass
Osat01G0015400.3 Terpenoid BAHD medium pass
Osat01G0015400.4 Terpenoid BAHD medium pass
Osat01G0016270.1 Terpenoid BAHD medium pass
Osat01G0016280.1 Terpenoid BAHD low borderline
Osat01G0016470.1 Terpenoid BAHD medium pass
Osat01G0016480.1 Terpenoid BAHD low borderline
Osat01G0016480.2 Terpenoid BAHD low borderline
Osat01G0017580.1 Terpenoid BAHD medium pass
Osat01G0019530.1 Terpenoid BAHD medium pass
Osat01G0025700.1 Terpenoid BAHD medium pass
Osat01G0025700.2 Terpenoid BAHD medium pass
Osat01G0025700.3 Terpenoid BAHD medium pass
Osat01G0027800.1 Terpenoid BAHD medium pass
Osat01G0027810.1 Terpenoid BAHD medium pass
Osat01G0028640.1 Terpenoid BAHD low borderline
Osat01G0028770.1 Terpenoid BAHD medium pass
Osat01G0030030.1 Terpenoid BAHD medium pass
Osat01G0032070.1 Terpenoid BAHD medium pass
Osat01G0035050.1 Terpenoid BAHD medium pass
Osat01G0035050.2 Terpenoid BAHD medium pass
Osat01G0038350.1 Terpenoid BAHD medium pass
Osat01G0038360.1 Terpenoid BAHD medium pass
Osat01G0039210.1 Terpenoid BAHD medium pass
Osat01G0042830.1 Terpenoid BAHD low borderline
Osat01G0043640.1 Terpenoid BAHD medium pass
Osat01G0043640.2 Terpenoid BAHD medium pass
Osat01G0044320.1 Terpenoid BAHD medium pass
Osat01G0044370.1 Terpenoid BAHD medium pass
Osat01G0045390.1 Terpenoid BAHD medium pass