PlantSME Plant secondary metabolism enzyme database

Oryza sativa (oryza_sativa)

Imported from atlas release summary for Oryza sativa.

2741
Candidate Protein Records
2290
Pathway-Level Records
5669
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 638 19 BAHD (236) View species results
Alkaloid pathway 531 24 7DLGT (95) View species results
Phenylpropanoid pathway 462 11 POD (239) View species results
Flavonoid pathway 317 11 UFGT (201) View species results
Steroid pathway 180 13 SMT1/SMT2/SMT3 (78) View species results
Rosmarinic acid pathway 162 7 C4H (77) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2120 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 417 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Osat07G0005220.2 Flavonoid F3H low borderline
Osat07G0005230.1 Flavonoid F3H medium pass
Osat08G0017800.1 Flavonoid F3H medium borderline
Osat08G0017830.1 Flavonoid F3H medium borderline
Osat08G0017860.1 Flavonoid F3H medium borderline
Osat08G0017880.1 Flavonoid F3H medium borderline
Osat08G0023500.1 Flavonoid F3H medium borderline
Osat08G0023500.2 Flavonoid F3H medium borderline
Osat08G0029550.1 Flavonoid F3H medium borderline
Osat09G0002470.1 Flavonoid F3H low borderline
Osat09G0002470.2 Flavonoid F3H low borderline
Osat09G0009240.1 Flavonoid F3H medium borderline
Osat09G0009260.1 Flavonoid F3H medium borderline
Osat09G0009280.1 Flavonoid F3H low borderline
Osat09G0015680.1 Flavonoid F3H medium borderline
Osat09G0015720.1 Flavonoid F3H medium borderline
Osat09G0024550.1 Flavonoid F3H medium borderline
Osat10G0020730.1 Flavonoid F3H low borderline
Osat10G0020730.2 Flavonoid F3H low borderline
Osat10G0020730.3 Flavonoid F3H low borderline
Osat10G0020730.4 Flavonoid F3H low borderline
Osat10G0020740.1 Flavonoid F3H low borderline
Osat10G0021690.1 Flavonoid F3H medium borderline
Osat10G0021690.2 Flavonoid F3H medium borderline
Osat10G0021690.3 Flavonoid F3H medium borderline
Osat10G0021690.4 Flavonoid F3H medium pass
Osat10G0023200.1 Flavonoid F3H medium borderline
Osat10G0023210.1 Flavonoid F3H medium borderline
Osat10G0023230.1 Flavonoid F3H medium borderline
Osat10G0023230.2 Flavonoid F3H medium borderline
Osat10G0023230.3 Flavonoid F3H medium borderline
Osat10G0023230.4 Flavonoid F3H medium borderline
Osat10G0023230.5 Flavonoid F3H medium borderline
Osat10G0023230.6 Flavonoid F3H medium borderline
Osat10G0023230.7 Flavonoid F3H medium borderline
Osat10G0023230.8 Flavonoid F3H medium borderline
Osat10G0023250.1 Flavonoid F3H medium borderline
Osat10G0023270.1 Flavonoid F3H medium borderline
Osat11G0002030.1 Flavonoid F3H low borderline
Osat11G0006490.1 Flavonoid F3H medium borderline
Osat11G0011440.1 Flavonoid F3H low borderline
Osat11G0014970.1 Flavonoid F3H medium borderline
Osat01G0022660.1 Flavonoid FLS medium borderline
Osat06G0029470.1 Flavonoid FLS low borderline
Osat06G0029470.2 Flavonoid FLS low borderline
Osat07G0005220.1 Flavonoid FLS medium borderline
Osat08G0009930.1 Flavonoid FLS medium borderline
Osat01G0017590.1 Flavonoid FNS medium borderline
Osat01G0023090.1 Flavonoid FNS medium borderline
Osat01G0023090.2 Flavonoid FNS medium borderline