PlantSME Plant secondary metabolism enzyme database

Oryza sativa (oryza_sativa)

Imported from atlas release summary for Oryza sativa.

2741
Candidate Protein Records
2290
Pathway-Level Records
5669
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 638 19 BAHD (236) View species results
Alkaloid pathway 531 24 7DLGT (95) View species results
Phenylpropanoid pathway 462 11 POD (239) View species results
Flavonoid pathway 317 11 UFGT (201) View species results
Steroid pathway 180 13 SMT1/SMT2/SMT3 (78) View species results
Rosmarinic acid pathway 162 7 C4H (77) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2120 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 417 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Osat08G0012370.1 Phenylpropanoid COMT medium pass
Osat08G0021840.1 Phenylpropanoid COMT medium pass
Osat08G0023680.1 Phenylpropanoid COMT low borderline
Osat09G0008650.1 Phenylpropanoid COMT medium pass
Osat09G0009600.1 Phenylpropanoid COMT low borderline
Osat10G0001090.1 Phenylpropanoid COMT medium pass
Osat10G0001110.1 Phenylpropanoid COMT medium pass
Osat10G0018280.1 Phenylpropanoid COMT low borderline
Osat11G0009460.1 Phenylpropanoid COMT medium pass
Osat11G0013340.1 Phenylpropanoid COMT low borderline
Osat11G0013400.1 Phenylpropanoid COMT low borderline
Osat11G0013420.1 Phenylpropanoid COMT low borderline
Osat11G0013430.1 Phenylpropanoid COMT low borderline
Osat11G0020080.1 Phenylpropanoid COMT medium pass
Osat12G0007010.1 Phenylpropanoid COMT medium pass
Osat12G0007120.1 Phenylpropanoid COMT medium pass
Osat12G0007130.1 Phenylpropanoid COMT medium pass
Osat12G0009430.1 Phenylpropanoid COMT medium pass
Osat12G0009440.1 Phenylpropanoid COMT medium pass
Osat12G0014480.1 Phenylpropanoid COMT medium pass
Osat12G0014500.1 Phenylpropanoid COMT medium pass
Osat12G0014670.1 Phenylpropanoid COMT medium pass
Osat12G0014690.1 Phenylpropanoid COMT low borderline
Osat12G0014700.1 Phenylpropanoid COMT medium pass
Osat12G0025550.1 Phenylpropanoid COMT low borderline
Osat12G0025550.2 Phenylpropanoid COMT low borderline
Osat12G0025550.3 Phenylpropanoid COMT low borderline
OsatChrUn0001200.1 Phenylpropanoid COMT low borderline
Osat01G0008910.1 Phenylpropanoid CSE medium pass
Osat01G0008920.1 Phenylpropanoid CSE medium pass
Osat01G0015480.1 Phenylpropanoid CSE medium pass
Osat01G0015620.1 Phenylpropanoid CSE medium pass
Osat01G0016360.1 Phenylpropanoid CSE medium pass
Osat01G0017380.1 Phenylpropanoid CSE medium pass
Osat01G0017390.1 Phenylpropanoid CSE medium pass
Osat01G0017400.1 Phenylpropanoid CSE medium pass
Osat01G0017420.1 Phenylpropanoid CSE medium pass
Osat01G0027710.1 Phenylpropanoid CSE medium pass
Osat01G0027720.1 Phenylpropanoid CSE medium pass
Osat01G0032530.1 Phenylpropanoid CSE medium pass
Osat01G0048140.1 Phenylpropanoid CSE medium pass
Osat01G0052910.1 Phenylpropanoid CSE medium pass
Osat02G0008560.1 Phenylpropanoid CSE medium pass
Osat02G0018430.1 Phenylpropanoid CSE medium pass
Osat02G0025020.1 Phenylpropanoid CSE low borderline
Osat02G0034630.1 Phenylpropanoid CSE medium pass
Osat04G0005760.1 Phenylpropanoid CSE medium pass
Osat04G0006030.1 Phenylpropanoid CSE medium pass
Osat04G0006060.1 Phenylpropanoid CSE medium pass
Osat04G0010980.1 Phenylpropanoid CSE medium pass