PlantSME Plant secondary metabolism enzyme database

Oryza sativa (oryza_sativa)

Imported from atlas release summary for Oryza sativa.

2741
Candidate Protein Records
2290
Pathway-Level Records
5669
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 638 19 BAHD (236) View species results
Alkaloid pathway 531 24 7DLGT (95) View species results
Phenylpropanoid pathway 462 11 POD (239) View species results
Flavonoid pathway 317 11 UFGT (201) View species results
Steroid pathway 180 13 SMT1/SMT2/SMT3 (78) View species results
Rosmarinic acid pathway 162 7 C4H (77) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2120 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 417 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Osat02G0010960.1 Flavonoid UFGT medium pass
Osat02G0018300.1 Flavonoid UFGT low borderline
Osat02G0019690.1 Flavonoid UFGT medium pass
Osat02G0025160.1 Flavonoid UFGT high pass
Osat02G0025180.1 Flavonoid UFGT medium pass
Osat02G0025190.1 Flavonoid UFGT medium pass
Osat02G0025890.1 Flavonoid UFGT high pass
Osat02G0029240.1 Flavonoid UFGT medium pass
Osat02G0037690.1 Flavonoid UFGT medium pass
Osat02G0037700.1 Flavonoid UFGT high pass
Osat02G0037720.1 Flavonoid UFGT medium pass
Osat02G0041210.1 Flavonoid UFGT medium pass
Osat03G0008640.1 Flavonoid UFGT medium pass
Osat03G0019000.1 Flavonoid UFGT medium pass
Osat03G0031720.1 Flavonoid UFGT high pass
Osat03G0033650.1 Flavonoid UFGT medium pass
Osat03G0034280.1 Flavonoid UFGT medium pass
Osat03G0034290.1 Flavonoid UFGT high pass
Osat03G0037340.1 Flavonoid UFGT high pass
Osat03G0038270.1 Flavonoid UFGT medium pass
Osat03G0038290.1 Flavonoid UFGT medium pass
Osat03G0038300.1 Flavonoid UFGT medium pass
Osat03G0038300.2 Flavonoid UFGT high pass
Osat03G0038320.1 Flavonoid UFGT medium pass
Osat03G0038330.1 Flavonoid UFGT medium pass
Osat03G0041940.1 Flavonoid UFGT high pass
Osat03G0042220.1 Flavonoid UFGT medium pass
Osat03G0043460.1 Flavonoid UFGT medium pass
Osat03G0044730.1 Flavonoid UFGT medium pass
Osat04G0005780.1 Flavonoid UFGT low borderline
Osat04G0005890.1 Flavonoid UFGT medium pass
Osat04G0005910.1 Flavonoid UFGT high pass
Osat04G0005920.1 Flavonoid UFGT high pass
Osat04G0005930.1 Flavonoid UFGT high pass
Osat04G0005940.1 Flavonoid UFGT medium pass
Osat04G0008740.1 Flavonoid UFGT high pass
Osat04G0008770.1 Flavonoid UFGT medium pass
Osat04G0008780.1 Flavonoid UFGT medium pass
Osat04G0008810.1 Flavonoid UFGT low borderline
Osat04G0008880.1 Flavonoid UFGT high pass
Osat04G0008880.2 Flavonoid UFGT high pass
Osat04G0008880.3 Flavonoid UFGT high pass
Osat04G0008880.4 Flavonoid UFGT high pass
Osat04G0008920.1 Flavonoid UFGT medium pass
Osat04G0010640.1 Flavonoid UFGT medium pass
Osat04G0011130.1 Flavonoid UFGT medium pass
Osat04G0011140.1 Flavonoid UFGT medium pass
Osat04G0011410.1 Flavonoid UFGT medium pass
Osat04G0011420.1 Flavonoid UFGT medium pass
Osat04G0011470.1 Flavonoid UFGT medium pass