PlantSME Plant secondary metabolism enzyme database

Oryza sativa (oryza_sativa)

Imported from atlas release summary for Oryza sativa.

2741
Candidate Protein Records
2290
Pathway-Level Records
5669
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 638 19 BAHD (236) View species results
Alkaloid pathway 531 24 7DLGT (95) View species results
Phenylpropanoid pathway 462 11 POD (239) View species results
Flavonoid pathway 317 11 UFGT (201) View species results
Steroid pathway 180 13 SMT1/SMT2/SMT3 (78) View species results
Rosmarinic acid pathway 162 7 C4H (77) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2120 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 417 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Osat06G0016670.1 Flavonoid UFGT high pass
Osat06G0024800.1 Flavonoid UFGT high pass
Osat06G0024810.1 Flavonoid UFGT medium pass
Osat06G0024920.1 Flavonoid UFGT medium pass
Osat06G0024950.1 Flavonoid UFGT medium pass
Osat07G0003670.1 Flavonoid UFGT high pass
Osat07G0007480.1 Flavonoid UFGT medium pass
Osat07G0007510.1 Flavonoid UFGT high pass
Osat07G0007540.1 Flavonoid UFGT medium pass
Osat07G0007550.1 Flavonoid UFGT high pass
Osat07G0007560.1 Flavonoid UFGT high pass
Osat07G0009930.1 Flavonoid UFGT high pass
Osat07G0009940.1 Flavonoid UFGT medium pass
Osat07G0009990.1 Flavonoid UFGT high pass
Osat07G0010020.1 Flavonoid UFGT high pass
Osat07G0010030.1 Flavonoid UFGT medium pass
Osat07G0010590.1 Flavonoid UFGT medium pass
Osat07G0014350.1 Flavonoid UFGT low borderline
Osat07G0014350.2 Flavonoid UFGT low borderline
Osat07G0014350.3 Flavonoid UFGT low borderline
Osat07G0018000.1 Flavonoid UFGT medium pass
Osat07G0018010.1 Flavonoid UFGT medium pass
Osat07G0018050.1 Flavonoid UFGT medium pass
Osat07G0018130.1 Flavonoid UFGT medium pass
Osat07G0018140.1 Flavonoid UFGT medium pass
Osat07G0018180.1 Flavonoid UFGT medium pass
Osat07G0018200.1 Flavonoid UFGT medium pass
Osat07G0019080.1 Flavonoid UFGT high pass
Osat07G0019110.1 Flavonoid UFGT high pass
Osat07G0019120.1 Flavonoid UFGT medium pass
Osat07G0019150.1 Flavonoid UFGT high pass
Osat07G0019550.1 Flavonoid UFGT high pass
Osat07G0019560.1 Flavonoid UFGT high pass
Osat07G0023370.1 Flavonoid UFGT high pass
Osat07G0027700.1 Flavonoid UFGT medium pass
Osat07G0030580.1 Flavonoid UFGT high pass
Osat07G0031440.1 Flavonoid UFGT medium pass
Osat08G0004940.1 Flavonoid UFGT medium pass
Osat08G0004990.1 Flavonoid UFGT medium pass
Osat08G0010200.1 Flavonoid UFGT medium pass
Osat08G0018490.1 Flavonoid UFGT medium pass
Osat08G0024060.1 Flavonoid UFGT high pass
Osat08G0024080.1 Flavonoid UFGT medium pass
Osat08G0024110.1 Flavonoid UFGT medium pass
Osat09G0001240.1 Flavonoid UFGT medium pass
Osat09G0002010.1 Flavonoid UFGT low borderline
Osat09G0007710.1 Flavonoid UFGT high pass
Osat09G0007750.1 Flavonoid UFGT medium pass
Osat09G0010960.1 Flavonoid UFGT medium pass
Osat09G0018030.1 Flavonoid UFGT medium pass