PlantSME Plant secondary metabolism enzyme database

Oryza sativa (oryza_sativa)

Imported from atlas release summary for Oryza sativa.

2741
Candidate Protein Records
2290
Pathway-Level Records
5669
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 638 19 BAHD (236) View species results
Alkaloid pathway 531 24 7DLGT (95) View species results
Phenylpropanoid pathway 462 11 POD (239) View species results
Flavonoid pathway 317 11 UFGT (201) View species results
Steroid pathway 180 13 SMT1/SMT2/SMT3 (78) View species results
Rosmarinic acid pathway 162 7 C4H (77) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2120 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 417 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Osat11G0015040.4 Alkaloid TRI/TRII medium pass
Osat11G0015040.5 Alkaloid TRI/TRII medium pass
Osat11G0015040.6 Alkaloid TRI/TRII medium pass
Osat11G0015050.1 Alkaloid TRI/TRII medium pass
Osat11G0015060.1 Alkaloid TRI/TRII medium pass
Osat11G0015290.1 Alkaloid TRI/TRII medium pass
Osat11G0019070.1 Alkaloid TRI/TRII medium pass
Osat11G0026950.1 Alkaloid TRI/TRII medium pass
Osat11G0027030.1 Alkaloid TRI/TRII medium pass
Osat12G0009490.1 Alkaloid TRI/TRII medium pass
Osat12G0010410.1 Alkaloid TRI/TRII medium pass
Osat01G0038370.1 Alkaloid TYDC_DDC medium borderline
Osat04G0002000.1 Alkaloid TYDC_DDC medium borderline
Osat05G0026740.1 Alkaloid TYDC_DDC medium borderline
Osat07G0015120.1 Alkaloid TYDC_DDC medium borderline
Osat08G0002990.1 Alkaloid TYDC_DDC medium borderline
Osat10G0011120.1 Alkaloid TYDC_DDC medium borderline
Osat10G0012330.1 Alkaloid TYDC_DDC medium borderline
Osat11G0020920.1 Alkaloid TYDC_DDC low borderline
Osat06G0010560.1 Alkaloid XMT_MXMT_DXMT medium borderline
Osat06G0010570.1 Alkaloid XMT_MXMT_DXMT medium borderline
Osat06G0014900.1 Alkaloid XMT_MXMT_DXMT medium borderline
Osat06G0014980.1 Alkaloid XMT_MXMT_DXMT medium borderline
Osat06G0014980.2 Alkaloid XMT_MXMT_DXMT medium borderline
Osat06G0014990.1 Alkaloid XMT_MXMT_DXMT medium borderline
Osat06G0015440.1 Alkaloid XMT_MXMT_DXMT medium borderline
Osat06G0015490.1 Alkaloid XMT_MXMT_DXMT medium borderline
Osat06G0015890.2 Alkaloid XMT_MXMT_DXMT medium borderline
Osat11G0010780.1 Alkaloid XMT_MXMT_DXMT medium borderline
Osat11G0010780.2 Alkaloid XMT_MXMT_DXMT medium borderline
Osat11G0010780.3 Alkaloid XMT_MXMT_DXMT medium borderline
Osat11G0010780.4 Alkaloid XMT_MXMT_DXMT medium borderline
Osat11G0010780.5 Alkaloid XMT_MXMT_DXMT medium borderline
Osat11G0010920.1 Alkaloid XMT_MXMT_DXMT medium borderline