PlantSME Plant secondary metabolism enzyme database

Oryza sativa (oryza_sativa)

Imported from atlas release summary for Oryza sativa.

2741
Candidate Protein Records
2290
Pathway-Level Records
5669
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 638 19 BAHD (236) View species results
Alkaloid pathway 531 24 7DLGT (95) View species results
Phenylpropanoid pathway 462 11 POD (239) View species results
Flavonoid pathway 317 11 UFGT (201) View species results
Steroid pathway 180 13 SMT1/SMT2/SMT3 (78) View species results
Rosmarinic acid pathway 162 7 C4H (77) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2120 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 417 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Osat07G0020250.1 Steroid CYP90D1 medium borderline
Osat07G0026330.1 Steroid CYP90D1 low borderline
Osat07G0029660.1 Steroid CYP90D1 low borderline
Osat07G0032050.1 Steroid CYP90D1 low borderline
Osat08G0020160.1 Steroid CYP90D1 low borderline
Osat09G0003620.1 Steroid CYP90D1 low borderline
Osat09G0011040.1 Steroid CYP90D1 low borderline
Osat09G0021080.1 Steroid CYP90D1 low borderline
Osat10G0001310.1 Steroid CYP90D1 low borderline
Osat10G0004810.1 Steroid CYP90D1 low borderline
Osat10G0009140.1 Steroid CYP90D1 low borderline
Osat11G0003170.1 Steroid CYP90D1 medium borderline
Osat12G0001430.1 Steroid CYP90D1 low borderline
Osat12G0002940.1 Steroid CYP90D1 medium borderline
Osat01G0003830.1 Steroid DET2 low borderline
Osat01G0044150.1 Steroid DET2 medium pass
Osat03G0027410.1 Steroid DWF1 low borderline
Osat07G0031360.1 Steroid DWF1 low borderline
Osat10G0012140.1 Steroid DWF1 medium pass
Osat10G0012140.2 Steroid DWF1 medium pass
Osat10G0012140.3 Steroid DWF1 medium pass
Osat10G0014420.1 Steroid DWF1 low borderline
Osat01G0008500.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0008510.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0008530.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0009740.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0017570.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0023060.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0023090.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0026910.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0026920.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0026930.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0028520.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0028520.2 Steroid DWF4/CYP90B1 low borderline
Osat01G0028530.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0028550.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0028560.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0028580.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0028590.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0028600.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0033430.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0035410.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0040620.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0040630.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0040690.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0044620.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0044620.2 Steroid DWF4/CYP90B1 low borderline
Osat01G0051380.1 Steroid DWF4/CYP90B1 low borderline
Osat01G0051810.1 Steroid DWF4/CYP90B1 low borderline
Osat02G0005760.1 Steroid DWF4/CYP90B1 low borderline