PlantSME Plant secondary metabolism enzyme database

Oryza sativa (oryza_sativa)

Imported from atlas release summary for Oryza sativa.

2741
Candidate Protein Records
2290
Pathway-Level Records
5669
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 638 19 BAHD (236) View species results
Alkaloid pathway 531 24 7DLGT (95) View species results
Phenylpropanoid pathway 462 11 POD (239) View species results
Flavonoid pathway 317 11 UFGT (201) View species results
Steroid pathway 180 13 SMT1/SMT2/SMT3 (78) View species results
Rosmarinic acid pathway 162 7 C4H (77) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2120 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 417 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Osat10G0009140.1 Flavonoid F3'H/CYP75B medium borderline
Osat10G0009150.1 Flavonoid F3'H/CYP75B medium borderline
Osat10G0012470.1 Flavonoid F3'H/CYP75B medium borderline
Osat10G0015200.1 Flavonoid F3'H/CYP75B medium borderline
Osat10G0015210.1 Flavonoid F3'H/CYP75B medium borderline
Osat10G0015220.1 Flavonoid F3'H/CYP75B medium borderline
Osat10G0019990.1 Flavonoid F3'H/CYP75B medium borderline
Osat10G0020060.1 Flavonoid F3'H/CYP75B medium borderline
Osat10G0020120.1 Flavonoid F3'H/CYP75B medium borderline
Osat10G0020130.1 Flavonoid F3'H/CYP75B medium borderline
Osat10G0020190.1 Flavonoid F3'H/CYP75B medium borderline
Osat10G0020880.1 Flavonoid F3'H/CYP75B medium borderline
Osat10G0020900.1 Flavonoid F3'H/CYP75B medium borderline
Osat10G0020900.2 Flavonoid F3'H/CYP75B medium borderline
Osat10G0020910.1 Flavonoid F3'H/CYP75B low borderline
Osat11G0016410.1 Flavonoid F3'H/CYP75B medium borderline
Osat11G0016410.2 Flavonoid F3'H/CYP75B medium borderline
Osat12G0001430.1 Flavonoid F3'H/CYP75B low borderline
Osat12G0001440.1 Flavonoid F3'H/CYP75B low borderline
Osat12G0006800.1 Flavonoid F3'H/CYP75B medium borderline
Osat01G0005950.1 Flavonoid F3H medium borderline
Osat01G0006840.1 Flavonoid F3H low borderline
Osat01G0006840.2 Flavonoid F3H low borderline
Osat01G0006840.3 Flavonoid F3H low borderline
Osat01G0017730.1 Flavonoid F3H medium borderline
Osat01G0017730.2 Flavonoid F3H medium borderline
Osat01G0017740.1 Flavonoid F3H medium borderline
Osat01G0018980.1 Flavonoid F3H medium borderline
Osat01G0025390.1 Flavonoid F3H medium borderline
Osat01G0036470.1 Flavonoid F3H low borderline
Osat01G0037390.1 Flavonoid F3H medium borderline
Osat01G0042770.1 Flavonoid F3H medium borderline
Osat01G0042770.2 Flavonoid F3H medium borderline
Osat01G0042770.3 Flavonoid F3H medium borderline
Osat01G0042770.4 Flavonoid F3H medium borderline
Osat01G0046510.1 Flavonoid F3H medium borderline
Osat01G0050250.1 Flavonoid F3H medium borderline
Osat02G0013410.1 Flavonoid F3H medium borderline
Osat02G0013410.2 Flavonoid F3H medium borderline
Osat02G0013410.3 Flavonoid F3H medium borderline
Osat02G0013410.4 Flavonoid F3H medium borderline
Osat02G0013410.5 Flavonoid F3H medium borderline
Osat02G0013410.6 Flavonoid F3H medium borderline
Osat02G0015850.1 Flavonoid F3H medium borderline
Osat02G0038450.1 Flavonoid F3H medium borderline
Osat02G0038760.1 Flavonoid F3H medium borderline
Osat02G0038760.2 Flavonoid F3H medium borderline
Osat02G0038760.3 Flavonoid F3H medium borderline
Osat03G0001790.1 Flavonoid F3H medium borderline
Osat03G0001790.2 Flavonoid F3H medium borderline