PlantSME Plant secondary metabolism enzyme database

Oryza sativa (oryza_sativa)

Imported from atlas release summary for Oryza sativa.

2741
Candidate Protein Records
2290
Pathway-Level Records
5669
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 638 19 BAHD (236) View species results
Alkaloid pathway 531 24 7DLGT (95) View species results
Phenylpropanoid pathway 462 11 POD (239) View species results
Flavonoid pathway 317 11 UFGT (201) View species results
Steroid pathway 180 13 SMT1/SMT2/SMT3 (78) View species results
Rosmarinic acid pathway 162 7 C4H (77) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2120 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 417 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Osat02G0001830.2 Alkaloid COR medium pass
Osat03G0010430.1 Alkaloid COR medium pass
Osat04G0003640.1 Alkaloid COR medium pass
Osat04G0019280.1 Alkaloid COR medium pass
Osat04G0019290.1 Alkaloid COR medium pass
Osat04G0019290.2 Alkaloid COR medium pass
Osat04G0019300.1 Alkaloid COR medium pass
Osat05G0022830.1 Alkaloid COR medium pass
Osat05G0022830.2 Alkaloid COR medium pass
Osat05G0022830.3 Alkaloid COR medium pass
Osat05G0024080.1 Alkaloid COR medium pass
Osat07G0003310.1 Alkaloid COR low borderline
Osat10G0000820.1 Alkaloid COR medium pass
Osat10G0000840.1 Alkaloid COR medium pass
Osat10G0000850.1 Alkaloid COR medium pass
Osat10G0000850.2 Alkaloid COR medium pass
Osat10G0000860.1 Alkaloid COR medium pass
Osat10G0000860.2 Alkaloid COR medium pass
Osat01G0033430.1 Alkaloid CYP719 medium borderline
Osat01G0033460.1 Alkaloid CYP719 medium borderline
Osat02G0009620.1 Alkaloid CYP719 medium borderline
Osat02G0009620.2 Alkaloid CYP719 medium borderline
Osat04G0020950.1 Alkaloid CYP719 medium borderline
Osat06G0023630.1 Alkaloid CYP719 medium borderline
Osat09G0011040.1 Alkaloid CYP719 medium borderline
Osat10G0001310.1 Alkaloid CYP719 low borderline
Osat10G0019920.1 Alkaloid CYP719 medium borderline
Osat10G0020120.1 Alkaloid CYP719 medium borderline
Osat10G0020130.1 Alkaloid CYP719 medium borderline
Osat02G0016030.1 Alkaloid CYP80B1 medium borderline
Osat04G0001650.1 Alkaloid CYP80B1 medium borderline
Osat04G0003860.1 Alkaloid CYP80B1 medium borderline
Osat06G0001950.1 Alkaloid CYP80B1 low borderline
Osat06G0001950.2 Alkaloid CYP80B1 low borderline
Osat06G0023580.1 Alkaloid CYP80B1 medium borderline
Osat07G0012800.1 Alkaloid CYP80B1 low borderline
Osat07G0023600.1 Alkaloid CYP80B1 medium borderline
Osat10G0004820.1 Alkaloid CYP80B1 medium borderline
Osat02G0001030.1 Alkaloid CYP80F1 medium borderline
Osat05G0020050.1 Alkaloid CYP80F1 medium borderline
Osat07G0016640.1 Alkaloid CYP80F1 medium borderline
Osat07G0023590.1 Alkaloid CYP80F1 medium borderline
Osat01G0023090.2 Alkaloid G8O/G8H medium pass
Osat01G0023090.3 Alkaloid G8O/G8H medium pass
Osat01G0024220.1 Alkaloid G8O/G8H medium borderline
Osat02G0000740.1 Alkaloid G8O/G8H medium borderline
Osat02G0006810.1 Alkaloid G8O/G8H medium borderline
Osat02G0006810.2 Alkaloid G8O/G8H medium borderline
Osat02G0006880.1 Alkaloid G8O/G8H medium borderline
Osat02G0009270.1 Alkaloid G8O/G8H medium borderline