PlantSME Plant secondary metabolism enzyme database

Oryza sativa (oryza_sativa)

Imported from atlas release summary for Oryza sativa.

2741
Candidate Protein Records
2290
Pathway-Level Records
5669
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 638 19 BAHD (236) View species results
Alkaloid pathway 531 24 7DLGT (95) View species results
Phenylpropanoid pathway 462 11 POD (239) View species results
Flavonoid pathway 317 11 UFGT (201) View species results
Steroid pathway 180 13 SMT1/SMT2/SMT3 (78) View species results
Rosmarinic acid pathway 162 7 C4H (77) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2120 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 417 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Osat12G0023270.1 Phenylpropanoid C3'H/CYP98A medium borderline
Osat12G0023320.1 Phenylpropanoid C3'H/CYP98A low borderline
Osat12G0027260.1 Phenylpropanoid C3'H/CYP98A medium borderline
Osat01G0008520.1 Phenylpropanoid C4H/CYP73A low borderline
Osat01G0008530.1 Phenylpropanoid C4H/CYP73A low borderline
Osat01G0023090.2 Phenylpropanoid C4H/CYP73A low borderline
Osat01G0023090.3 Phenylpropanoid C4H/CYP73A low borderline
Osat01G0033470.1 Phenylpropanoid C4H/CYP73A medium borderline
Osat01G0041870.1 Phenylpropanoid C4H/CYP73A medium borderline
Osat02G0006810.1 Phenylpropanoid C4H/CYP73A low borderline
Osat02G0006810.2 Phenylpropanoid C4H/CYP73A low borderline
Osat02G0009270.1 Phenylpropanoid C4H/CYP73A medium borderline
Osat03G0025520.1 Phenylpropanoid C4H/CYP73A low borderline
Osat03G0027830.1 Phenylpropanoid C4H/CYP73A low borderline
Osat03G0037090.1 Phenylpropanoid C4H/CYP73A low borderline
Osat03G0038490.1 Phenylpropanoid C4H/CYP73A low borderline
Osat03G0038510.1 Phenylpropanoid C4H/CYP73A low borderline
Osat06G0023660.1 Phenylpropanoid C4H/CYP73A medium borderline
Osat06G0023660.2 Phenylpropanoid C4H/CYP73A medium borderline
Osat06G0023660.3 Phenylpropanoid C4H/CYP73A medium borderline
Osat06G0028170.1 Phenylpropanoid C4H/CYP73A low borderline
Osat06G0028170.2 Phenylpropanoid C4H/CYP73A low borderline
Osat06G0028170.3 Phenylpropanoid C4H/CYP73A low borderline
Osat07G0020240.1 Phenylpropanoid C4H/CYP73A low borderline
Osat07G0020240.2 Phenylpropanoid C4H/CYP73A low borderline
Osat07G0029660.1 Phenylpropanoid C4H/CYP73A medium borderline
Osat08G0015160.1 Phenylpropanoid C4H/CYP73A low borderline
Osat08G0015160.2 Phenylpropanoid C4H/CYP73A low borderline
Osat10G0002870.1 Phenylpropanoid C4H/CYP73A medium borderline
Osat10G0010970.2 Phenylpropanoid C4H/CYP73A low borderline
Osat11G0016540.1 Phenylpropanoid C4H/CYP73A low borderline
Osat12G0006800.1 Phenylpropanoid C4H/CYP73A medium borderline
Osat01G0016710.1 Phenylpropanoid CAD low borderline
Osat01G0022180.1 Phenylpropanoid CAD medium borderline
Osat01G0022180.2 Phenylpropanoid CAD medium borderline
Osat01G0022180.3 Phenylpropanoid CAD medium borderline
Osat02G0007020.1 Phenylpropanoid CAD medium pass
Osat02G0017730.1 Phenylpropanoid CAD low borderline
Osat02G0024620.1 Phenylpropanoid CAD low borderline
Osat02G0024620.2 Phenylpropanoid CAD low borderline
Osat02G0024620.3 Phenylpropanoid CAD low borderline
Osat02G0024620.4 Phenylpropanoid CAD low borderline
Osat02G0024670.1 Phenylpropanoid CAD low borderline
Osat02G0024670.2 Phenylpropanoid CAD low borderline
Osat03G0006600.1 Phenylpropanoid CAD low borderline
Osat03G0009440.1 Phenylpropanoid CAD medium pass
Osat03G0018240.1 Phenylpropanoid CAD low borderline
Osat03G0018250.1 Phenylpropanoid CAD low borderline
Osat03G0019190.1 Phenylpropanoid CAD medium pass
Osat03G0019210.1 Phenylpropanoid CAD medium pass