PlantSME Plant secondary metabolism enzyme database

Quercus lobata (quercus_lobata)

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Imported from atlas release summary for Quercus lobata.

2899
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 826 19 UGT (341) View species results
Alkaloid pathway 706 25 7DLGT (169) View species results
Phenylpropanoid pathway 535 12 POD (200) View species results
Flavonoid pathway 393 10 UFGT (289) View species results
Rosmarinic acid pathway 235 7 C4H (110) View species results
Steroid pathway 204 14 CAS (120) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2661 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 398 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C3'H/CYP98A
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Gene Pathway Family Confidence Status
quercus_lobata_QL03p056474 Phenylpropanoid C3'H/CYP98A low borderline
quercus_lobata_QL03p056647 Phenylpropanoid C3'H/CYP98A medium borderline
quercus_lobata_QL03p056673 Phenylpropanoid C3'H/CYP98A medium borderline
quercus_lobata_QL03p056739 Phenylpropanoid C3'H/CYP98A medium borderline
quercus_lobata_QL03p056805 Phenylpropanoid C3'H/CYP98A medium borderline
quercus_lobata_QL03p057389 Phenylpropanoid C3'H/CYP98A medium borderline
quercus_lobata_QL03p060297 Phenylpropanoid C3'H/CYP98A low borderline
quercus_lobata_QL03p060323 Phenylpropanoid C3'H/CYP98A low borderline
quercus_lobata_QL03p060329 Phenylpropanoid C3'H/CYP98A low borderline
quercus_lobata_QL03p060341 Phenylpropanoid C3'H/CYP98A medium borderline
quercus_lobata_QL03p060394 Phenylpropanoid C3'H/CYP98A medium borderline
quercus_lobata_QL03p064767 Phenylpropanoid C3'H/CYP98A medium borderline
quercus_lobata_QL03p068146 Phenylpropanoid C3'H/CYP98A low borderline
quercus_lobata_QL03p068276 Phenylpropanoid C3'H/CYP98A low borderline
quercus_lobata_QL03p068433 Phenylpropanoid C3'H/CYP98A low borderline
quercus_lobata_QL03p068959 Phenylpropanoid C3'H/CYP98A low borderline
quercus_lobata_QL03p068994 Phenylpropanoid C3'H/CYP98A low borderline
quercus_lobata_QL03p073599 Phenylpropanoid C3'H/CYP98A low borderline
quercus_lobata_QL03p073609 Phenylpropanoid C3'H/CYP98A low borderline
quercus_lobata_QL03p073889 Phenylpropanoid C3'H/CYP98A medium borderline
quercus_lobata_QL04p004934 Phenylpropanoid C3'H/CYP98A medium borderline
quercus_lobata_QL04p004975 Phenylpropanoid C3'H/CYP98A medium borderline
quercus_lobata_QL04p005025 Phenylpropanoid C3'H/CYP98A medium borderline
quercus_lobata_QL04p005075 Phenylpropanoid C3'H/CYP98A medium borderline
quercus_lobata_QL04p005090 Phenylpropanoid C3'H/CYP98A medium borderline
quercus_lobata_QL04p005106 Phenylpropanoid C3'H/CYP98A low borderline
quercus_lobata_QL04p021763 Phenylpropanoid C3'H/CYP98A low borderline
quercus_lobata_QL04p025107 Phenylpropanoid C3'H/CYP98A low borderline
quercus_lobata_QL04p026622 Phenylpropanoid C3'H/CYP98A low borderline
quercus_lobata_QL04p026632 Phenylpropanoid C3'H/CYP98A low borderline
quercus_lobata_QL04p027023 Phenylpropanoid C3'H/CYP98A low borderline
quercus_lobata_QL04p027032 Phenylpropanoid C3'H/CYP98A low borderline
quercus_lobata_QL04p027128 Phenylpropanoid C3'H/CYP98A low borderline
quercus_lobata_QL04p027482 Phenylpropanoid C3'H/CYP98A low borderline
quercus_lobata_QL04p028239 Phenylpropanoid C3'H/CYP98A medium borderline
quercus_lobata_QL04p028264 Phenylpropanoid C3'H/CYP98A medium borderline
quercus_lobata_QL04p028312 Phenylpropanoid C3'H/CYP98A medium borderline
quercus_lobata_QL04p028424 Phenylpropanoid C3'H/CYP98A medium borderline
quercus_lobata_QL04p028453 Phenylpropanoid C3'H/CYP98A medium borderline
quercus_lobata_QL04p028473 Phenylpropanoid C3'H/CYP98A medium borderline
quercus_lobata_QL04p028500 Phenylpropanoid C3'H/CYP98A medium borderline
quercus_lobata_QL04p030644 Phenylpropanoid C3'H/CYP98A medium borderline
quercus_lobata_QL04p030655 Phenylpropanoid C3'H/CYP98A medium borderline
quercus_lobata_QL04p030661 Phenylpropanoid C3'H/CYP98A medium borderline
quercus_lobata_QL04p040639 Phenylpropanoid C3'H/CYP98A low borderline
quercus_lobata_QL04p040685 Phenylpropanoid C3'H/CYP98A low borderline
quercus_lobata_QL04p040996 Phenylpropanoid C3'H/CYP98A low borderline
quercus_lobata_QL04p042961 Phenylpropanoid C3'H/CYP98A medium borderline
quercus_lobata_QL04p060504 Phenylpropanoid C3'H/CYP98A medium borderline
quercus_lobata_QL04p062166 Phenylpropanoid C3'H/CYP98A low borderline