PlantSME Plant secondary metabolism enzyme database

Quercus lobata (quercus_lobata)

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Imported from atlas release summary for Quercus lobata.

2899
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 826 19 UGT (341) View species results
Alkaloid pathway 706 25 7DLGT (169) View species results
Phenylpropanoid pathway 535 12 POD (200) View species results
Flavonoid pathway 393 10 UFGT (289) View species results
Rosmarinic acid pathway 235 7 C4H (110) View species results
Steroid pathway 204 14 CAS (120) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2661 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 398 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
quercus_lobata_QL03p057389 Rosmarinic Acid C4H low borderline
quercus_lobata_QL03p057398 Rosmarinic Acid C4H low borderline
quercus_lobata_QL03p060297 Rosmarinic Acid C4H low borderline
quercus_lobata_QL03p060323 Rosmarinic Acid C4H low borderline
quercus_lobata_QL03p060341 Rosmarinic Acid C4H medium pass
quercus_lobata_QL03p060394 Rosmarinic Acid C4H low borderline
quercus_lobata_QL03p064767 Rosmarinic Acid C4H medium pass
quercus_lobata_QL03p068146 Rosmarinic Acid C4H low borderline
quercus_lobata_QL03p068230 Rosmarinic Acid C4H low borderline
quercus_lobata_QL03p068266 Rosmarinic Acid C4H low borderline
quercus_lobata_QL03p068276 Rosmarinic Acid C4H low borderline
quercus_lobata_QL03p068959 Rosmarinic Acid C4H low borderline
quercus_lobata_QL03p068994 Rosmarinic Acid C4H low borderline
quercus_lobata_QL03p073599 Rosmarinic Acid C4H low borderline
quercus_lobata_QL03p073889 Rosmarinic Acid C4H low borderline
quercus_lobata_QL04p004931 Rosmarinic Acid C4H low borderline
quercus_lobata_QL04p004934 Rosmarinic Acid C4H medium pass
quercus_lobata_QL04p004937 Rosmarinic Acid C4H low borderline
quercus_lobata_QL04p004975 Rosmarinic Acid C4H medium pass
quercus_lobata_QL04p004995 Rosmarinic Acid C4H low borderline
quercus_lobata_QL04p005020 Rosmarinic Acid C4H low borderline
quercus_lobata_QL04p005025 Rosmarinic Acid C4H medium pass
quercus_lobata_QL04p005056 Rosmarinic Acid C4H low borderline
quercus_lobata_QL04p005070 Rosmarinic Acid C4H low borderline
quercus_lobata_QL04p005075 Rosmarinic Acid C4H medium pass
quercus_lobata_QL04p005087 Rosmarinic Acid C4H low borderline
quercus_lobata_QL04p005090 Rosmarinic Acid C4H medium pass
quercus_lobata_QL04p005106 Rosmarinic Acid C4H low borderline
quercus_lobata_QL04p005150 Rosmarinic Acid C4H low borderline
quercus_lobata_QL04p021763 Rosmarinic Acid C4H low borderline
quercus_lobata_QL04p025107 Rosmarinic Acid C4H low borderline
quercus_lobata_QL04p026622 Rosmarinic Acid C4H low borderline
quercus_lobata_QL04p026632 Rosmarinic Acid C4H low borderline
quercus_lobata_QL04p027023 Rosmarinic Acid C4H low borderline
quercus_lobata_QL04p027032 Rosmarinic Acid C4H low borderline
quercus_lobata_QL04p028239 Rosmarinic Acid C4H low borderline
quercus_lobata_QL04p028264 Rosmarinic Acid C4H low borderline
quercus_lobata_QL04p028268 Rosmarinic Acid C4H low borderline
quercus_lobata_QL04p028312 Rosmarinic Acid C4H low borderline
quercus_lobata_QL04p028317 Rosmarinic Acid C4H low borderline
quercus_lobata_QL04p028395 Rosmarinic Acid C4H medium pass
quercus_lobata_QL04p028424 Rosmarinic Acid C4H low borderline
quercus_lobata_QL04p028453 Rosmarinic Acid C4H low borderline
quercus_lobata_QL04p028473 Rosmarinic Acid C4H low borderline
quercus_lobata_QL04p028500 Rosmarinic Acid C4H medium pass
quercus_lobata_QL04p030644 Rosmarinic Acid C4H medium pass
quercus_lobata_QL04p030655 Rosmarinic Acid C4H low borderline
quercus_lobata_QL04p030661 Rosmarinic Acid C4H low borderline
quercus_lobata_QL04p040639 Rosmarinic Acid C4H low borderline
quercus_lobata_QL04p040685 Rosmarinic Acid C4H low borderline