PlantSME Plant secondary metabolism enzyme database

Quercus lobata (quercus_lobata)

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Imported from atlas release summary for Quercus lobata.

2899
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 826 19 UGT (341) View species results
Alkaloid pathway 706 25 7DLGT (169) View species results
Phenylpropanoid pathway 535 12 POD (200) View species results
Flavonoid pathway 393 10 UFGT (289) View species results
Rosmarinic acid pathway 235 7 C4H (110) View species results
Steroid pathway 204 14 CAS (120) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2661 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 398 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CODM/T6ODM
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Gene Pathway Family Confidence Status Best Target
quercus_lobata_QL01p008212 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL01p008250 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL01p008253 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL01p008285 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL01p008343 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL01p008366 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL01p008411 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL01p016105 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL01p016178 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL01p038724 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL02p062927 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
quercus_lobata_QL02p090427 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL02p090439 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL02p090453 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL02p090461 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL02p090484 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL02p090497 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL02p090519 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL03p008106 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
quercus_lobata_QL03p035357 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
quercus_lobata_QL03p035417 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
quercus_lobata_QL03p035460 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL03p035503 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
quercus_lobata_QL03p057951 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL03p057955 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL04p000121 Alkaloid CODM/T6ODM medium pass CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
quercus_lobata_QL04p003079 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL04p003083 Alkaloid CODM/T6ODM medium pass CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
quercus_lobata_QL04p076873 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL04p076951 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL05p025749 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
quercus_lobata_QL05p032272 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL05p032279 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL05p051061 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
quercus_lobata_QL05p052893 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL05p052923 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL05p052985 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL05p052989 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL05p053002 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL05p058025 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL05p060133 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
quercus_lobata_QL05p060863 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL05p060869 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL05p060881 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL05p060891 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL05p060905 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
quercus_lobata_QL05p060970 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
quercus_lobata_QL05p060980 Alkaloid CODM/T6ODM medium pass CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
quercus_lobata_QL05p070154 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
quercus_lobata_QL05p075177 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO