PlantSME Plant secondary metabolism enzyme database

Quercus lobata (quercus_lobata)

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Imported from atlas release summary for Quercus lobata.

2899
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 826 19 UGT (341) View species results
Alkaloid pathway 706 25 7DLGT (169) View species results
Phenylpropanoid pathway 535 12 POD (200) View species results
Flavonoid pathway 393 10 UFGT (289) View species results
Rosmarinic acid pathway 235 7 C4H (110) View species results
Steroid pathway 204 14 CAS (120) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2661 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 398 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP71
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Gene Pathway Family Confidence Status Best Target
quercus_lobata_QL08p028301 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
quercus_lobata_QL08p051969 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
quercus_lobata_QL08p063156 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
quercus_lobata_QL09p037431 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
quercus_lobata_QL09p046436 Terpenoid CYP71 medium pass CYP71__00002__sp_W8JDE2_C71Y1_CATRO
quercus_lobata_QL09p046552 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
quercus_lobata_QL09p046614 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
quercus_lobata_QL09p046619 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
quercus_lobata_QL09p047295 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
quercus_lobata_QL10p004512 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
quercus_lobata_QL10p004645 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
quercus_lobata_QL10p006163 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
quercus_lobata_QL10p006233 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
quercus_lobata_QL10p006243 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
quercus_lobata_QL10p006259 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
quercus_lobata_QL10p006411 Terpenoid CYP71 low borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
quercus_lobata_QL10p006422 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
quercus_lobata_QL10p006449 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
quercus_lobata_QL10p006543 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
quercus_lobata_QL10p006583 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
quercus_lobata_QL10p006626 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
quercus_lobata_QL10p008322 Terpenoid CYP71 medium pass CYP71__00002__sp_W8JDE2_C71Y1_CATRO
quercus_lobata_QL10p024903 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
quercus_lobata_QL11p038266 Terpenoid CYP71 low borderline CYP71__00001__sp_Q8W4D0_CPY71_ARATH
quercus_lobata_QL11p047665 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
quercus_lobata_QL11p049893 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
quercus_lobata_QL11p051233 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
quercus_lobata_QL12p019486 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
quercus_lobata_QL12p042419 Terpenoid CYP71 low borderline CYP71__00001__sp_Q8W4D0_CPY71_ARATH
quercus_lobata_QL93p0186_0045 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO