PlantSME Plant secondary metabolism enzyme database

Quercus lobata (quercus_lobata)

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Imported from atlas release summary for Quercus lobata.

2899
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 826 19 UGT (341) View species results
Alkaloid pathway 706 25 7DLGT (169) View species results
Phenylpropanoid pathway 535 12 POD (200) View species results
Flavonoid pathway 393 10 UFGT (289) View species results
Rosmarinic acid pathway 235 7 C4H (110) View species results
Steroid pathway 204 14 CAS (120) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2661 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 398 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
quercus_lobata_QL09p050144 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL09p053245 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL10p000051 Steroid DWF4/CYP90B1 medium borderline
quercus_lobata_QL10p000061 Steroid DWF4/CYP90B1 medium borderline
quercus_lobata_QL10p000068 Steroid DWF4/CYP90B1 medium borderline
quercus_lobata_QL10p006163 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL10p006190 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL10p006233 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL10p006243 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL10p006626 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL10p019261 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL10p024642 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL10p024800 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL10p024903 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL10p028615 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL10p028641 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL10p028679 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL10p029355 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL10p029369 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL10p029386 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL10p035893 Steroid DWF4/CYP90B1 medium borderline
quercus_lobata_QL11p000414 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL11p000449 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL11p007332 Steroid DWF4/CYP90B1 medium borderline
quercus_lobata_QL11p012337 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL11p051233 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL11p053989 Steroid DWF4/CYP90B1 medium borderline
quercus_lobata_QL11p054026 Steroid DWF4/CYP90B1 medium borderline
quercus_lobata_QL12p001176 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL12p001841 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL12p001905 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL12p006553 Steroid DWF4/CYP90B1 medium pass
quercus_lobata_QL12p006603 Steroid DWF4/CYP90B1 medium borderline
quercus_lobata_QL12p014408 Steroid DWF4/CYP90B1 medium borderline
quercus_lobata_QL12p014455 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL12p014559 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL12p014614 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL12p014649 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL12p016122 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL12p016295 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL12p017401 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL12p035108 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL12p039186 Steroid DWF4/CYP90B1 low borderline
quercus_lobata_QL93p0186_0045 Steroid DWF4/CYP90B1 low borderline