PlantSME Plant secondary metabolism enzyme database

Quercus lobata (quercus_lobata)

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Imported from atlas release summary for Quercus lobata.

2899
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 826 19 UGT (341) View species results
Alkaloid pathway 706 25 7DLGT (169) View species results
Phenylpropanoid pathway 535 12 POD (200) View species results
Flavonoid pathway 393 10 UFGT (289) View species results
Rosmarinic acid pathway 235 7 C4H (110) View species results
Steroid pathway 204 14 CAS (120) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2661 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 398 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
quercus_lobata_QL05p026029 Flavonoid F3H low borderline
quercus_lobata_QL05p026042 Flavonoid F3H low borderline
quercus_lobata_QL05p032272 Flavonoid F3H medium borderline
quercus_lobata_QL05p032279 Flavonoid F3H medium borderline
quercus_lobata_QL05p051061 Flavonoid F3H low borderline
quercus_lobata_QL05p052893 Flavonoid F3H medium borderline
quercus_lobata_QL05p052923 Flavonoid F3H medium borderline
quercus_lobata_QL05p052985 Flavonoid F3H medium borderline
quercus_lobata_QL05p052989 Flavonoid F3H medium borderline
quercus_lobata_QL05p053002 Flavonoid F3H medium borderline
quercus_lobata_QL05p058025 Flavonoid F3H medium borderline
quercus_lobata_QL05p060133 Flavonoid F3H medium borderline
quercus_lobata_QL05p060863 Flavonoid F3H medium borderline
quercus_lobata_QL05p060881 Flavonoid F3H medium borderline
quercus_lobata_QL05p060905 Flavonoid F3H medium borderline
quercus_lobata_QL05p060970 Flavonoid F3H medium borderline
quercus_lobata_QL05p068698 Flavonoid F3H low borderline
quercus_lobata_QL05p069069 Flavonoid F3H low borderline
quercus_lobata_QL05p070154 Flavonoid F3H medium borderline
quercus_lobata_QL05p075177 Flavonoid F3H medium borderline
quercus_lobata_QL06p006800 Flavonoid F3H low borderline
quercus_lobata_QL06p008364 Flavonoid F3H medium borderline
quercus_lobata_QL06p016799 Flavonoid F3H medium borderline
quercus_lobata_QL06p016844 Flavonoid F3H medium borderline
quercus_lobata_QL06p016865 Flavonoid F3H medium borderline
quercus_lobata_QL06p016878 Flavonoid F3H medium borderline
quercus_lobata_QL06p016886 Flavonoid F3H medium borderline
quercus_lobata_QL06p016907 Flavonoid F3H medium borderline
quercus_lobata_QL06p016915 Flavonoid F3H medium borderline
quercus_lobata_QL06p016924 Flavonoid F3H medium borderline
quercus_lobata_QL06p016947 Flavonoid F3H medium borderline
quercus_lobata_QL06p032767 Flavonoid F3H medium borderline
quercus_lobata_QL06p040316 Flavonoid F3H low borderline
quercus_lobata_QL06p040443 Flavonoid F3H low borderline
quercus_lobata_QL06p049362 Flavonoid F3H medium borderline
quercus_lobata_QL06p049385 Flavonoid F3H medium borderline
quercus_lobata_QL06p049394 Flavonoid F3H medium borderline
quercus_lobata_QL06p049404 Flavonoid F3H medium borderline
quercus_lobata_QL06p049421 Flavonoid F3H medium borderline
quercus_lobata_QL06p049435 Flavonoid F3H medium borderline
quercus_lobata_QL06p050859 Flavonoid F3H medium borderline
quercus_lobata_QL06p053550 Flavonoid F3H low borderline
quercus_lobata_QL07p035552 Flavonoid F3H medium borderline
quercus_lobata_QL07p038393 Flavonoid F3H medium borderline
quercus_lobata_QL07p038414 Flavonoid F3H medium borderline
quercus_lobata_QL07p041472 Flavonoid F3H medium borderline
quercus_lobata_QL07p042611 Flavonoid F3H medium borderline
quercus_lobata_QL08p013216 Flavonoid F3H low borderline
quercus_lobata_QL08p026225 Flavonoid F3H low borderline
quercus_lobata_QL08p030483 Flavonoid F3H medium borderline