PlantSME Plant secondary metabolism enzyme database

Quercus lobata (quercus_lobata)

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Imported from atlas release summary for Quercus lobata.

2899
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 826 19 UGT (341) View species results
Alkaloid pathway 706 25 7DLGT (169) View species results
Phenylpropanoid pathway 535 12 POD (200) View species results
Flavonoid pathway 393 10 UFGT (289) View species results
Rosmarinic acid pathway 235 7 C4H (110) View species results
Steroid pathway 204 14 CAS (120) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2661 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 398 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
quercus_lobata_QL08p030520 Flavonoid F3H medium borderline
quercus_lobata_QL08p030580 Flavonoid F3H medium borderline
quercus_lobata_QL08p047664 Flavonoid F3H medium borderline
quercus_lobata_QL08p053019 Flavonoid F3H medium borderline
quercus_lobata_QL08p053026 Flavonoid F3H medium borderline
quercus_lobata_QL09p002640 Flavonoid F3H medium borderline
quercus_lobata_QL09p006935 Flavonoid F3H medium borderline
quercus_lobata_QL09p020541 Flavonoid F3H medium borderline
quercus_lobata_QL09p027673 Flavonoid F3H medium borderline
quercus_lobata_QL09p029713 Flavonoid F3H medium borderline
quercus_lobata_QL09p029757 Flavonoid F3H medium borderline
quercus_lobata_QL09p030981 Flavonoid F3H medium borderline
quercus_lobata_QL09p032570 Flavonoid F3H medium borderline
quercus_lobata_QL09p037971 Flavonoid F3H medium borderline
quercus_lobata_QL09p037974 Flavonoid F3H low borderline
quercus_lobata_QL09p038021 Flavonoid F3H medium borderline
quercus_lobata_QL09p038028 Flavonoid F3H low borderline
quercus_lobata_QL09p038054 Flavonoid F3H low borderline
quercus_lobata_QL09p038073 Flavonoid F3H medium borderline
quercus_lobata_QL09p038383 Flavonoid F3H medium borderline
quercus_lobata_QL09p038391 Flavonoid F3H medium borderline
quercus_lobata_QL09p040576 Flavonoid F3H medium borderline
quercus_lobata_QL09p040592 Flavonoid F3H medium borderline
quercus_lobata_QL09p040612 Flavonoid F3H medium borderline
quercus_lobata_QL09p040635 Flavonoid F3H medium borderline
quercus_lobata_QL09p040661 Flavonoid F3H medium borderline
quercus_lobata_QL09p040708 Flavonoid F3H medium borderline
quercus_lobata_QL09p040740 Flavonoid F3H medium borderline
quercus_lobata_QL09p040786 Flavonoid F3H medium borderline
quercus_lobata_QL09p040832 Flavonoid F3H medium borderline
quercus_lobata_QL09p040858 Flavonoid F3H medium borderline
quercus_lobata_QL09p050055 Flavonoid F3H medium borderline
quercus_lobata_QL10p016576 Flavonoid F3H low borderline
quercus_lobata_QL10p035603 Flavonoid F3H low borderline
quercus_lobata_QL10p035613 Flavonoid F3H low borderline
quercus_lobata_QL10p039200 Flavonoid F3H medium borderline
quercus_lobata_QL10p042454 Flavonoid F3H medium borderline
quercus_lobata_QL10p057611 Flavonoid F3H low borderline
quercus_lobata_QL10p057657 Flavonoid F3H low borderline
quercus_lobata_QL11p018093 Flavonoid F3H low borderline
quercus_lobata_QL11p023272 Flavonoid F3H medium borderline
quercus_lobata_QL11p023372 Flavonoid F3H medium borderline
quercus_lobata_QL11p023410 Flavonoid F3H medium borderline
quercus_lobata_QL11p023441 Flavonoid F3H medium borderline
quercus_lobata_QL11p023489 Flavonoid F3H medium borderline
quercus_lobata_QL11p023633 Flavonoid F3H medium borderline
quercus_lobata_QL11p023647 Flavonoid F3H medium borderline
quercus_lobata_QL11p023686 Flavonoid F3H medium borderline
quercus_lobata_QL11p028109 Flavonoid F3H medium borderline
quercus_lobata_QL11p030091 Flavonoid F3H medium borderline