PlantSME Plant secondary metabolism enzyme database

Quercus lobata (quercus_lobata)

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Imported from atlas release summary for Quercus lobata.

2899
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 826 19 UGT (341) View species results
Alkaloid pathway 706 25 7DLGT (169) View species results
Phenylpropanoid pathway 535 12 POD (200) View species results
Flavonoid pathway 393 10 UFGT (289) View species results
Rosmarinic acid pathway 235 7 C4H (110) View species results
Steroid pathway 204 14 CAS (120) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2661 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 398 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3'H/CYP75B
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Gene Pathway Family Confidence Status
quercus_lobata_QL04p028424 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL04p028453 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL04p028473 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL04p028500 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL04p040685 Flavonoid F3'H/CYP75B low borderline
quercus_lobata_QL04p040996 Flavonoid F3'H/CYP75B low borderline
quercus_lobata_QL04p067413 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL04p088875 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL04p093695 Flavonoid F3'H/CYP75B low borderline
quercus_lobata_QL05p019387 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL05p052939 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL05p081467 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL05p081481 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL05p081526 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL05p081534 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL06p020357 Flavonoid F3'H/CYP75B low borderline
quercus_lobata_QL06p032138 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL06p035384 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL06p048855 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL07p000400 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL07p012598 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL07p012607 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL07p013338 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL07p014764 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL07p040847 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL07p040860 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL07p041486 Flavonoid F3'H/CYP75B low borderline
quercus_lobata_QL08p000016 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL08p004965 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL08p004985 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL08p005003 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL08p046355 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL08p050279 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL08p050334 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL08p051611 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL08p054156 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL08p061872 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL08p065365 Flavonoid F3'H/CYP75B low borderline
quercus_lobata_QL09p013863 Flavonoid F3'H/CYP75B low borderline
quercus_lobata_QL09p013875 Flavonoid F3'H/CYP75B low borderline
quercus_lobata_QL09p014819 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL09p014883 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL09p014887 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL09p015115 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL09p015120 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL09p015140 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL09p020473 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL09p046619 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL09p049973 Flavonoid F3'H/CYP75B medium borderline
quercus_lobata_QL09p050013 Flavonoid F3'H/CYP75B medium borderline