PlantSME Plant secondary metabolism enzyme database

Quercus lobata (quercus_lobata)

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Imported from atlas release summary for Quercus lobata.

2899
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 826 19 UGT (341) View species results
Alkaloid pathway 706 25 7DLGT (169) View species results
Phenylpropanoid pathway 535 12 POD (200) View species results
Flavonoid pathway 393 10 UFGT (289) View species results
Rosmarinic acid pathway 235 7 C4H (110) View species results
Steroid pathway 204 14 CAS (120) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2661 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 398 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
quercus_lobata_QL01p008271 Alkaloid H6H low borderline
quercus_lobata_QL01p008353 Alkaloid H6H low borderline
quercus_lobata_QL01p016128 Alkaloid H6H low borderline
quercus_lobata_QL02p027162 Alkaloid H6H medium borderline
quercus_lobata_QL02p035486 Alkaloid H6H low borderline
quercus_lobata_QL02p035492 Alkaloid H6H low borderline
quercus_lobata_QL02p086468 Alkaloid H6H high pass
quercus_lobata_QL02p090469 Alkaloid H6H low borderline
quercus_lobata_QL02p090544 Alkaloid H6H low borderline
quercus_lobata_QL03p031760 Alkaloid H6H medium pass
quercus_lobata_QL03p031774 Alkaloid H6H medium pass
quercus_lobata_QL03p031790 Alkaloid H6H low borderline
quercus_lobata_QL03p031795 Alkaloid H6H high pass
quercus_lobata_QL03p031833 Alkaloid H6H high pass
quercus_lobata_QL03p035365 Alkaloid H6H low borderline
quercus_lobata_QL03p057882 Alkaloid H6H medium borderline
quercus_lobata_QL03p057936 Alkaloid H6H medium borderline
quercus_lobata_QL03p057961 Alkaloid H6H medium borderline
quercus_lobata_QL03p057977 Alkaloid H6H medium borderline
quercus_lobata_QL04p000135 Alkaloid H6H medium borderline
quercus_lobata_QL04p000158 Alkaloid H6H medium borderline
quercus_lobata_QL04p003054 Alkaloid H6H medium borderline
quercus_lobata_QL04p003073 Alkaloid H6H medium borderline
quercus_lobata_QL04p070209 Alkaloid H6H low borderline
quercus_lobata_QL04p076879 Alkaloid H6H low borderline
quercus_lobata_QL05p020342 Alkaloid H6H low borderline
quercus_lobata_QL05p025781 Alkaloid H6H low borderline
quercus_lobata_QL05p026022 Alkaloid H6H low borderline
quercus_lobata_QL05p026029 Alkaloid H6H low borderline
quercus_lobata_QL05p026042 Alkaloid H6H low borderline
quercus_lobata_QL05p046798 Alkaloid H6H low borderline
quercus_lobata_QL05p060119 Alkaloid H6H low borderline
quercus_lobata_QL06p006800 Alkaloid H6H low borderline
quercus_lobata_QL06p008364 Alkaloid H6H medium borderline
quercus_lobata_QL06p016878 Alkaloid H6H medium pass
quercus_lobata_QL06p016915 Alkaloid H6H medium borderline
quercus_lobata_QL06p016924 Alkaloid H6H high pass
quercus_lobata_QL06p016947 Alkaloid H6H medium borderline
quercus_lobata_QL06p016950 Alkaloid H6H medium pass
quercus_lobata_QL06p032767 Alkaloid H6H high pass
quercus_lobata_QL06p040316 Alkaloid H6H low borderline
quercus_lobata_QL06p040443 Alkaloid H6H low borderline
quercus_lobata_QL06p040449 Alkaloid H6H low borderline
quercus_lobata_QL06p049369 Alkaloid H6H low borderline
quercus_lobata_QL06p050859 Alkaloid H6H medium borderline
quercus_lobata_QL07p032560 Alkaloid H6H low borderline
quercus_lobata_QL07p041472 Alkaloid H6H medium borderline
quercus_lobata_QL08p030483 Alkaloid H6H medium borderline
quercus_lobata_QL08p030520 Alkaloid H6H medium borderline
quercus_lobata_QL08p030580 Alkaloid H6H medium borderline