PlantSME Plant secondary metabolism enzyme database

Quercus lobata (quercus_lobata)

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Imported from atlas release summary for Quercus lobata.

2899
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 826 19 UGT (341) View species results
Alkaloid pathway 706 25 7DLGT (169) View species results
Phenylpropanoid pathway 535 12 POD (200) View species results
Flavonoid pathway 393 10 UFGT (289) View species results
Rosmarinic acid pathway 235 7 C4H (110) View species results
Steroid pathway 204 14 CAS (120) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2661 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 398 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
quercus_lobata_QL08p047664 Alkaloid H6H medium borderline
quercus_lobata_QL08p053019 Alkaloid H6H medium borderline
quercus_lobata_QL08p053026 Alkaloid H6H medium borderline
quercus_lobata_QL09p002640 Alkaloid H6H medium borderline
quercus_lobata_QL09p006935 Alkaloid H6H medium borderline
quercus_lobata_QL09p032570 Alkaloid H6H medium borderline
quercus_lobata_QL09p037971 Alkaloid H6H medium borderline
quercus_lobata_QL09p037974 Alkaloid H6H low borderline
quercus_lobata_QL09p038021 Alkaloid H6H medium pass
quercus_lobata_QL09p038054 Alkaloid H6H low borderline
quercus_lobata_QL09p038073 Alkaloid H6H medium pass
quercus_lobata_QL09p038383 Alkaloid H6H medium borderline
quercus_lobata_QL09p038391 Alkaloid H6H medium borderline
quercus_lobata_QL09p040576 Alkaloid H6H medium borderline
quercus_lobata_QL09p040592 Alkaloid H6H medium borderline
quercus_lobata_QL09p040612 Alkaloid H6H high pass
quercus_lobata_QL09p040635 Alkaloid H6H medium borderline
quercus_lobata_QL09p040661 Alkaloid H6H medium borderline
quercus_lobata_QL09p040701 Alkaloid H6H medium pass
quercus_lobata_QL09p040708 Alkaloid H6H medium pass
quercus_lobata_QL09p040740 Alkaloid H6H medium borderline
quercus_lobata_QL09p040786 Alkaloid H6H medium borderline
quercus_lobata_QL09p040816 Alkaloid H6H low borderline
quercus_lobata_QL09p040832 Alkaloid H6H medium borderline
quercus_lobata_QL09p040858 Alkaloid H6H medium borderline
quercus_lobata_QL09p044729 Alkaloid H6H low borderline
quercus_lobata_QL10p035603 Alkaloid H6H low borderline
quercus_lobata_QL10p035613 Alkaloid H6H low borderline
quercus_lobata_QL10p039200 Alkaloid H6H medium borderline
quercus_lobata_QL10p057454 Alkaloid H6H low borderline
quercus_lobata_QL10p057585 Alkaloid H6H low borderline
quercus_lobata_QL10p057611 Alkaloid H6H low borderline
quercus_lobata_QL10p057631 Alkaloid H6H low borderline
quercus_lobata_QL10p057657 Alkaloid H6H low borderline
quercus_lobata_QL10p057695 Alkaloid H6H low borderline
quercus_lobata_QL11p023272 Alkaloid H6H medium pass
quercus_lobata_QL11p023410 Alkaloid H6H medium pass
quercus_lobata_QL11p023674 Alkaloid H6H low borderline
quercus_lobata_QL11p036465 Alkaloid H6H low borderline
quercus_lobata_QL11p038715 Alkaloid H6H medium borderline
quercus_lobata_QL11p038886 Alkaloid H6H medium borderline
quercus_lobata_QL11p040197 Alkaloid H6H medium borderline
quercus_lobata_QL11p050920 Alkaloid H6H medium pass
quercus_lobata_QL12p018742 Alkaloid H6H low borderline
quercus_lobata_QL12p020415 Alkaloid H6H low borderline
quercus_lobata_QL93p0116_0009 Alkaloid H6H medium borderline