PlantSME Plant secondary metabolism enzyme database

Quercus lobata (quercus_lobata)

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Imported from atlas release summary for Quercus lobata.

2899
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 826 19 UGT (341) View species results
Alkaloid pathway 706 25 7DLGT (169) View species results
Phenylpropanoid pathway 535 12 POD (200) View species results
Flavonoid pathway 393 10 UFGT (289) View species results
Rosmarinic acid pathway 235 7 C4H (110) View species results
Steroid pathway 204 14 CAS (120) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2661 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 398 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
quercus_lobata_QL05p025953 Flavonoid IFS low borderline
quercus_lobata_QL05p047353 Flavonoid IFS low borderline
quercus_lobata_QL05p052958 Flavonoid IFS medium borderline
quercus_lobata_QL05p058568 Flavonoid IFS low borderline
quercus_lobata_QL05p058621 Flavonoid IFS medium borderline
quercus_lobata_QL05p058648 Flavonoid IFS medium borderline
quercus_lobata_QL05p058743 Flavonoid IFS low borderline
quercus_lobata_QL05p063602 Flavonoid IFS low borderline
quercus_lobata_QL05p065028 Flavonoid IFS low borderline
quercus_lobata_QL05p065085 Flavonoid IFS low borderline
quercus_lobata_QL05p071789 Flavonoid IFS low borderline
quercus_lobata_QL05p078135 Flavonoid IFS medium borderline
quercus_lobata_QL05p081454 Flavonoid IFS medium borderline
quercus_lobata_QL05p081475 Flavonoid IFS medium borderline
quercus_lobata_QL05p081504 Flavonoid IFS low borderline
quercus_lobata_QL05p081520 Flavonoid IFS medium borderline
quercus_lobata_QL05p081542 Flavonoid IFS medium borderline
quercus_lobata_QL05p081551 Flavonoid IFS medium borderline
quercus_lobata_QL05p081567 Flavonoid IFS medium borderline
quercus_lobata_QL05p084303 Flavonoid IFS low borderline
quercus_lobata_QL05p085702 Flavonoid IFS low borderline
quercus_lobata_QL05p085817 Flavonoid IFS low borderline
quercus_lobata_QL06p001892 Flavonoid IFS medium borderline
quercus_lobata_QL06p001898 Flavonoid IFS medium borderline
quercus_lobata_QL06p001929 Flavonoid IFS medium borderline
quercus_lobata_QL06p003817 Flavonoid IFS low borderline
quercus_lobata_QL06p020334 Flavonoid IFS medium borderline
quercus_lobata_QL06p032497 Flavonoid IFS medium borderline
quercus_lobata_QL06p034060 Flavonoid IFS medium borderline
quercus_lobata_QL06p044004 Flavonoid IFS low borderline
quercus_lobata_QL06p044008 Flavonoid IFS medium borderline
quercus_lobata_QL06p048335 Flavonoid IFS medium borderline
quercus_lobata_QL06p048846 Flavonoid IFS medium borderline
quercus_lobata_QL07p000348 Flavonoid IFS medium borderline
quercus_lobata_QL07p000362 Flavonoid IFS medium borderline
quercus_lobata_QL07p000419 Flavonoid IFS medium borderline
quercus_lobata_QL07p000444 Flavonoid IFS low borderline
quercus_lobata_QL07p000458 Flavonoid IFS medium borderline
quercus_lobata_QL07p000489 Flavonoid IFS medium borderline
quercus_lobata_QL07p012578 Flavonoid IFS medium borderline
quercus_lobata_QL07p012754 Flavonoid IFS medium borderline
quercus_lobata_QL07p012889 Flavonoid IFS medium borderline
quercus_lobata_QL07p014669 Flavonoid IFS medium borderline
quercus_lobata_QL07p014811 Flavonoid IFS medium borderline
quercus_lobata_QL07p014824 Flavonoid IFS medium borderline
quercus_lobata_QL07p014954 Flavonoid IFS medium borderline
quercus_lobata_QL07p015176 Flavonoid IFS medium borderline
quercus_lobata_QL07p015269 Flavonoid IFS medium borderline
quercus_lobata_QL07p030620 Flavonoid IFS low borderline
quercus_lobata_QL07p031412 Flavonoid IFS low borderline