PlantSME Plant secondary metabolism enzyme database

Quercus lobata (quercus_lobata)

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Imported from atlas release summary for Quercus lobata.

2899
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 826 19 UGT (341) View species results
Alkaloid pathway 706 25 7DLGT (169) View species results
Phenylpropanoid pathway 535 12 POD (200) View species results
Flavonoid pathway 393 10 UFGT (289) View species results
Rosmarinic acid pathway 235 7 C4H (110) View species results
Steroid pathway 204 14 CAS (120) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2661 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 398 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status
quercus_lobata_QL05p072811 Phenylpropanoid LAC low borderline
quercus_lobata_QL06p046576 Phenylpropanoid LAC medium pass
quercus_lobata_QL06p050340 Phenylpropanoid LAC medium pass
quercus_lobata_QL06p050358 Phenylpropanoid LAC medium pass
quercus_lobata_QL06p050379 Phenylpropanoid LAC medium pass
quercus_lobata_QL06p050395 Phenylpropanoid LAC medium pass
quercus_lobata_QL06p050405 Phenylpropanoid LAC medium pass
quercus_lobata_QL06p050417 Phenylpropanoid LAC medium pass
quercus_lobata_QL07p027603 Phenylpropanoid LAC medium pass
quercus_lobata_QL07p027616 Phenylpropanoid LAC medium pass
quercus_lobata_QL07p027647 Phenylpropanoid LAC medium pass
quercus_lobata_QL07p027692 Phenylpropanoid LAC medium pass
quercus_lobata_QL07p048818 Phenylpropanoid LAC medium pass
quercus_lobata_QL07p048861 Phenylpropanoid LAC medium pass
quercus_lobata_QL07p048871 Phenylpropanoid LAC medium pass
quercus_lobata_QL08p045841 Phenylpropanoid LAC medium pass
quercus_lobata_QL08p062608 Phenylpropanoid LAC medium pass
quercus_lobata_QL08p063932 Phenylpropanoid LAC medium pass
quercus_lobata_QL09p010642 Phenylpropanoid LAC medium pass
quercus_lobata_QL09p010678 Phenylpropanoid LAC medium pass
quercus_lobata_QL09p024552 Phenylpropanoid LAC medium pass
quercus_lobata_QL09p024626 Phenylpropanoid LAC medium pass
quercus_lobata_QL10p028068 Phenylpropanoid LAC medium pass
quercus_lobata_QL10p048442 Phenylpropanoid LAC low borderline
quercus_lobata_QL11p034598 Phenylpropanoid LAC medium pass
quercus_lobata_QL11p034620 Phenylpropanoid LAC medium pass
quercus_lobata_QL11p044603 Phenylpropanoid LAC medium pass
quercus_lobata_QL11p044660 Phenylpropanoid LAC medium pass
quercus_lobata_QL11p053378 Phenylpropanoid LAC low borderline
quercus_lobata_QL12p023007 Phenylpropanoid LAC medium pass
quercus_lobata_QL93p0181_0065 Phenylpropanoid LAC medium pass