PlantSME Plant secondary metabolism enzyme database

Quercus lobata (quercus_lobata)

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Imported from atlas release summary for Quercus lobata.

2899
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 826 19 UGT (341) View species results
Alkaloid pathway 706 25 7DLGT (169) View species results
Phenylpropanoid pathway 535 12 POD (200) View species results
Flavonoid pathway 393 10 UFGT (289) View species results
Rosmarinic acid pathway 235 7 C4H (110) View species results
Steroid pathway 204 14 CAS (120) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2661 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 398 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
quercus_lobata_QL08p033823 Alkaloid NMT medium pass NMT__00032__sp_Q5PP37_ATXR2_ARATH
quercus_lobata_QL08p034245 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
quercus_lobata_QL08p047282 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
quercus_lobata_QL08p047358 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
quercus_lobata_QL08p047470 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
quercus_lobata_QL08p047492 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
quercus_lobata_QL08p047610 Alkaloid NMT medium pass NMT__00011__sp_A9X7L0_ANMT_RUTGR
quercus_lobata_QL08p047646 Alkaloid NMT medium pass NMT__00011__sp_A9X7L0_ANMT_RUTGR
quercus_lobata_QL08p050821 Alkaloid NMT low borderline NMT__00068__sp_Q9XI84_RBCMT_ARATH
quercus_lobata_QL09p002637 Alkaloid NMT medium pass NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
quercus_lobata_QL09p007788 Alkaloid NMT medium pass NMT__00056__sp_Q9FNE9_ATXR6_ARATH
quercus_lobata_QL09p009467 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
quercus_lobata_QL09p020551 Alkaloid NMT medium borderline NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
quercus_lobata_QL09p020572 Alkaloid NMT low borderline NMT__00070__sp_W5U2K2_NMT_CATRO
quercus_lobata_QL09p020586 Alkaloid NMT medium borderline NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
quercus_lobata_QL09p025782 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
quercus_lobata_QL09p025796 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
quercus_lobata_QL09p027015 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
quercus_lobata_QL09p032370 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
quercus_lobata_QL09p032394 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
quercus_lobata_QL09p034485 Alkaloid NMT medium borderline NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI
quercus_lobata_QL10p000430 Alkaloid NMT low borderline NMT__00033__sp_Q5QD03_SUVH3_CHLRE
quercus_lobata_QL10p028523 Alkaloid NMT medium borderline NMT__00057__sp_Q9FR44_PEAM1_ARATH
quercus_lobata_QL10p044299 Alkaloid NMT medium pass NMT__00024__sp_P0CB22_ATX2_ARATH
quercus_lobata_QL10p048975 Alkaloid NMT medium pass NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
quercus_lobata_QL10p049880 Alkaloid NMT medium pass NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
quercus_lobata_QL10p049908 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
quercus_lobata_QL10p065188 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
quercus_lobata_QL11p035074 Alkaloid NMT medium pass NMT__00016__sp_F4JNX3_CMKMT_ARATH
quercus_lobata_QL11p053824 Alkaloid NMT medium borderline NMT__00059__sp_Q9M571_PEAMT_SPIOL
quercus_lobata_QL12p008941 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
quercus_lobata_QL12p008959 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
quercus_lobata_QL12p012230 Alkaloid NMT low borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
quercus_lobata_QL12p019781 Alkaloid NMT medium pass NMT__00069__sp_Q9ZSM8_EZA1_ARATH
quercus_lobata_QL12p024588 Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
quercus_lobata_QL12p033243 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
quercus_lobata_QL12p035319 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ