PlantSME Plant secondary metabolism enzyme database

Quercus lobata (quercus_lobata)

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Imported from atlas release summary for Quercus lobata.

2899
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 826 19 UGT (341) View species results
Alkaloid pathway 706 25 7DLGT (169) View species results
Phenylpropanoid pathway 535 12 POD (200) View species results
Flavonoid pathway 393 10 UFGT (289) View species results
Rosmarinic acid pathway 235 7 C4H (110) View species results
Steroid pathway 204 14 CAS (120) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2661 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 398 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
quercus_lobata_QL02p101298 Alkaloid T3O medium borderline
quercus_lobata_QL02p101475 Alkaloid T3O medium borderline
quercus_lobata_QL02p101734 Alkaloid T3O medium borderline
quercus_lobata_QL03p022895 Alkaloid T3O medium borderline
quercus_lobata_QL03p023467 Alkaloid T3O medium pass
quercus_lobata_QL03p042719 Alkaloid T3O medium borderline
quercus_lobata_QL03p044248 Alkaloid T3O low borderline
quercus_lobata_QL03p056467 Alkaloid T3O medium pass
quercus_lobata_QL03p060297 Alkaloid T3O medium borderline
quercus_lobata_QL03p060323 Alkaloid T3O medium borderline
quercus_lobata_QL03p060341 Alkaloid T3O medium borderline
quercus_lobata_QL03p064767 Alkaloid T3O medium borderline
quercus_lobata_QL03p068146 Alkaloid T3O low borderline
quercus_lobata_QL03p068959 Alkaloid T3O medium pass
quercus_lobata_QL03p068994 Alkaloid T3O medium pass
quercus_lobata_QL03p073599 Alkaloid T3O medium pass
quercus_lobata_QL03p073609 Alkaloid T3O low borderline
quercus_lobata_QL04p004934 Alkaloid T3O medium borderline
quercus_lobata_QL04p004975 Alkaloid T3O medium borderline
quercus_lobata_QL04p005056 Alkaloid T3O medium borderline
quercus_lobata_QL04p005075 Alkaloid T3O medium borderline
quercus_lobata_QL04p005150 Alkaloid T3O medium borderline
quercus_lobata_QL04p021763 Alkaloid T3O low borderline
quercus_lobata_QL04p026632 Alkaloid T3O medium pass
quercus_lobata_QL04p027032 Alkaloid T3O medium pass
quercus_lobata_QL04p027128 Alkaloid T3O medium pass
quercus_lobata_QL04p027482 Alkaloid T3O medium pass
quercus_lobata_QL04p028239 Alkaloid T3O medium borderline
quercus_lobata_QL04p028264 Alkaloid T3O medium borderline
quercus_lobata_QL04p028312 Alkaloid T3O medium borderline
quercus_lobata_QL04p028395 Alkaloid T3O medium borderline
quercus_lobata_QL04p028424 Alkaloid T3O medium borderline
quercus_lobata_QL04p028453 Alkaloid T3O medium borderline
quercus_lobata_QL04p028473 Alkaloid T3O medium borderline
quercus_lobata_QL04p028500 Alkaloid T3O medium borderline
quercus_lobata_QL04p030644 Alkaloid T3O medium borderline
quercus_lobata_QL04p030661 Alkaloid T3O medium borderline
quercus_lobata_QL04p040639 Alkaloid T3O low borderline
quercus_lobata_QL04p042961 Alkaloid T3O medium borderline
quercus_lobata_QL04p066240 Alkaloid T3O medium pass
quercus_lobata_QL04p087939 Alkaloid T3O low borderline
quercus_lobata_QL04p088160 Alkaloid T3O medium pass
quercus_lobata_QL04p088284 Alkaloid T3O medium pass
quercus_lobata_QL04p088296 Alkaloid T3O medium pass
quercus_lobata_QL04p088385 Alkaloid T3O medium pass
quercus_lobata_QL04p088412 Alkaloid T3O medium pass
quercus_lobata_QL04p088853 Alkaloid T3O medium pass
quercus_lobata_QL04p088875 Alkaloid T3O medium pass
quercus_lobata_QL04p088889 Alkaloid T3O medium pass
quercus_lobata_QL04p088936 Alkaloid T3O medium pass