PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
XP_023901640.1 Alkaloid 6OMT_4OMT_SOMT low borderline
XP_023908840.1 Alkaloid 6OMT_4OMT_SOMT low borderline
XP_023870343.1 Alkaloid 7DLGT medium pass
XP_023870748.1 Alkaloid 7DLGT medium pass
XP_023871459.1 Alkaloid 7DLGT high pass
XP_023871460.1 Alkaloid 7DLGT high pass
XP_023871462.1 Alkaloid 7DLGT high pass
XP_023871463.1 Alkaloid 7DLGT high pass
XP_023871464.1 Alkaloid 7DLGT high pass
XP_023871465.1 Alkaloid 7DLGT high pass
XP_023871466.1 Alkaloid 7DLGT low borderline
XP_023871471.1 Alkaloid 7DLGT medium pass
XP_023871472.1 Alkaloid 7DLGT medium pass
XP_023871473.1 Alkaloid 7DLGT medium pass
XP_023871956.1 Alkaloid 7DLGT medium pass
XP_023872154.1 Alkaloid 7DLGT low borderline
XP_023872298.1 Alkaloid 7DLGT low borderline
XP_023872328.1 Alkaloid 7DLGT low borderline
XP_023872329.1 Alkaloid 7DLGT low borderline
XP_023872330.1 Alkaloid 7DLGT medium pass
XP_023872335.1 Alkaloid 7DLGT low borderline
XP_023872560.1 Alkaloid 7DLGT low borderline
XP_023873100.1 Alkaloid 7DLGT low borderline
XP_023873567.1 Alkaloid 7DLGT low borderline
XP_023873648.1 Alkaloid 7DLGT high pass
XP_023873653.1 Alkaloid 7DLGT medium pass
XP_023873657.1 Alkaloid 7DLGT high pass
XP_023874123.1 Alkaloid 7DLGT low borderline
XP_023874124.1 Alkaloid 7DLGT low borderline
XP_023874125.1 Alkaloid 7DLGT low borderline
XP_023874385.1 Alkaloid 7DLGT high pass
XP_023874816.1 Alkaloid 7DLGT medium pass
XP_023874822.1 Alkaloid 7DLGT medium pass
XP_023874831.1 Alkaloid 7DLGT medium pass
XP_023874839.1 Alkaloid 7DLGT high pass
XP_023874892.1 Alkaloid 7DLGT low borderline
XP_023874899.1 Alkaloid 7DLGT low borderline
XP_023874900.1 Alkaloid 7DLGT low borderline
XP_023874926.1 Alkaloid 7DLGT low borderline
XP_023875027.1 Alkaloid 7DLGT low borderline
XP_023875154.1 Alkaloid 7DLGT medium pass
XP_023875199.1 Alkaloid 7DLGT medium pass
XP_023875597.1 Alkaloid 7DLGT medium pass
XP_023875925.1 Alkaloid 7DLGT low borderline
XP_023875932.1 Alkaloid 7DLGT medium pass
XP_023875936.1 Alkaloid 7DLGT medium pass
XP_023875937.1 Alkaloid 7DLGT low borderline
XP_023875938.1 Alkaloid 7DLGT medium pass
XP_023875939.1 Alkaloid 7DLGT medium pass
XP_023876142.1 Alkaloid 7DLGT medium pass