PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
XP_023876189.1 Alkaloid 7DLGT low borderline
XP_023876282.1 Alkaloid 7DLGT medium pass
XP_023876410.1 Alkaloid 7DLGT medium pass
XP_023876705.1 Alkaloid 7DLGT low borderline
XP_023876916.1 Alkaloid 7DLGT medium pass
XP_023877803.1 Alkaloid 7DLGT low borderline
XP_023877832.1 Alkaloid 7DLGT low borderline
XP_023877881.1 Alkaloid 7DLGT low borderline
XP_023877912.1 Alkaloid 7DLGT medium pass
XP_023878236.1 Alkaloid 7DLGT low borderline
XP_023878244.1 Alkaloid 7DLGT low borderline
XP_023878399.1 Alkaloid 7DLGT low borderline
XP_023879091.1 Alkaloid 7DLGT low borderline
XP_023879235.1 Alkaloid 7DLGT medium pass
XP_023879730.1 Alkaloid 7DLGT medium pass
XP_023879793.1 Alkaloid 7DLGT medium pass
XP_023880873.1 Alkaloid 7DLGT medium pass
XP_023880882.1 Alkaloid 7DLGT medium pass
XP_023880895.1 Alkaloid 7DLGT medium pass
XP_023880917.1 Alkaloid 7DLGT medium pass
XP_023881251.1 Alkaloid 7DLGT medium pass
XP_023881565.1 Alkaloid 7DLGT low borderline
XP_023881569.1 Alkaloid 7DLGT medium pass
XP_023881821.1 Alkaloid 7DLGT low borderline
XP_023881822.1 Alkaloid 7DLGT low borderline
XP_023881906.1 Alkaloid 7DLGT medium pass
XP_023882326.1 Alkaloid 7DLGT medium pass
XP_023882438.1 Alkaloid 7DLGT medium pass
XP_023882868.1 Alkaloid 7DLGT medium pass
XP_023883239.1 Alkaloid 7DLGT low borderline
XP_023883450.1 Alkaloid 7DLGT low borderline
XP_023883854.1 Alkaloid 7DLGT medium pass
XP_023883919.1 Alkaloid 7DLGT medium pass
XP_023883929.1 Alkaloid 7DLGT low borderline
XP_023884097.1 Alkaloid 7DLGT low borderline
XP_023884471.1 Alkaloid 7DLGT low borderline
XP_023884515.1 Alkaloid 7DLGT high pass
XP_023884600.1 Alkaloid 7DLGT low borderline
XP_023884601.1 Alkaloid 7DLGT low borderline
XP_023884809.1 Alkaloid 7DLGT medium pass
XP_023885287.1 Alkaloid 7DLGT medium pass
XP_023885498.1 Alkaloid 7DLGT low borderline
XP_023885827.1 Alkaloid 7DLGT low borderline
XP_023885853.1 Alkaloid 7DLGT low borderline
XP_023885854.1 Alkaloid 7DLGT low borderline
XP_023885939.1 Alkaloid 7DLGT medium pass
XP_023886502.1 Alkaloid 7DLGT low borderline
XP_023886541.1 Alkaloid 7DLGT low borderline
XP_023887047.1 Alkaloid 7DLGT medium pass
XP_023887176.1 Alkaloid 7DLGT low borderline