PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
XP_023887435.1 Alkaloid 7DLGT medium pass
XP_023887463.1 Alkaloid 7DLGT low borderline
XP_023887464.1 Alkaloid 7DLGT medium pass
XP_023887569.1 Alkaloid 7DLGT high pass
XP_023887700.1 Alkaloid 7DLGT medium pass
XP_023888050.1 Alkaloid 7DLGT low borderline
XP_023888361.1 Alkaloid 7DLGT low borderline
XP_023888370.1 Alkaloid 7DLGT low borderline
XP_023888729.1 Alkaloid 7DLGT medium pass
XP_023888730.1 Alkaloid 7DLGT low borderline
XP_023889014.1 Alkaloid 7DLGT medium pass
XP_023889015.1 Alkaloid 7DLGT medium pass
XP_023889019.1 Alkaloid 7DLGT medium pass
XP_023890807.1 Alkaloid 7DLGT low borderline
XP_023890822.1 Alkaloid 7DLGT low borderline
XP_023890824.1 Alkaloid 7DLGT low borderline
XP_023890895.1 Alkaloid 7DLGT high pass
XP_023890911.1 Alkaloid 7DLGT medium pass
XP_023890913.1 Alkaloid 7DLGT medium pass
XP_023891116.1 Alkaloid 7DLGT low borderline
XP_023891215.1 Alkaloid 7DLGT low borderline
XP_023891353.1 Alkaloid 7DLGT low borderline
XP_023891359.1 Alkaloid 7DLGT medium pass
XP_023891627.1 Alkaloid 7DLGT medium pass
XP_023892277.1 Alkaloid 7DLGT medium pass
XP_023892278.1 Alkaloid 7DLGT medium pass
XP_023892536.1 Alkaloid 7DLGT low borderline
XP_023892549.1 Alkaloid 7DLGT low borderline
XP_023892550.1 Alkaloid 7DLGT low borderline
XP_023892551.1 Alkaloid 7DLGT low borderline
XP_023892815.1 Alkaloid 7DLGT medium pass
XP_023892820.1 Alkaloid 7DLGT medium pass
XP_023893136.1 Alkaloid 7DLGT low borderline
XP_023893290.1 Alkaloid 7DLGT low borderline
XP_023894486.1 Alkaloid 7DLGT low borderline
XP_023895143.1 Alkaloid 7DLGT low borderline
XP_023895206.1 Alkaloid 7DLGT high pass
XP_023895313.1 Alkaloid 7DLGT low borderline
XP_023895378.1 Alkaloid 7DLGT low borderline
XP_023895534.1 Alkaloid 7DLGT low borderline
XP_023895794.1 Alkaloid 7DLGT medium pass
XP_023896042.1 Alkaloid 7DLGT low borderline
XP_023896383.1 Alkaloid 7DLGT medium pass
XP_023896736.1 Alkaloid 7DLGT low borderline
XP_023897208.1 Alkaloid 7DLGT high pass
XP_023898119.1 Alkaloid 7DLGT medium pass
XP_023898137.1 Alkaloid 7DLGT low borderline
XP_023898150.1 Alkaloid 7DLGT low borderline
XP_023898635.1 Alkaloid 7DLGT low borderline
XP_023898692.1 Alkaloid 7DLGT low borderline