PlantSME Plant secondary metabolism enzyme database

Rhynchospora breviuscula (rhynchospora_breviuscula)

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Imported from atlas release summary for Rhynchospora breviuscula.

1607
Candidate Protein Records
1461
Pathway-Level Records
3344
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 371 12 POD (154) View species results
Terpenoid pathway 357 20 BAHD (128) View species results
Alkaloid pathway 331 20 7DLGT (62) View species results
Flavonoid pathway 221 8 UFGT (121) View species results
Rosmarinic acid pathway 123 7 C4H (53) View species results
Steroid pathway 58 10 SMT1/SMT2/SMT3 (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1221 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 228 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
rhynchospora_breviuscula_mRNA7288 Alkaloid 7DLGT low borderline
rhynchospora_breviuscula_mRNA7311 Alkaloid 7DLGT low borderline
rhynchospora_breviuscula_mRNA736 Alkaloid 7DLGT high pass
rhynchospora_breviuscula_mRNA785 Alkaloid 7DLGT low borderline
rhynchospora_breviuscula_mRNA7977 Alkaloid 7DLGT low borderline
rhynchospora_breviuscula_mRNA8119 Alkaloid 7DLGT medium pass
rhynchospora_breviuscula_mRNA8540 Alkaloid 7DLGT low borderline
rhynchospora_breviuscula_mRNA883 Alkaloid 7DLGT low borderline
rhynchospora_breviuscula_mRNA884 Alkaloid 7DLGT low borderline
rhynchospora_breviuscula_mRNA885 Alkaloid 7DLGT low borderline
rhynchospora_breviuscula_mRNA9012 Alkaloid 7DLGT medium pass
rhynchospora_breviuscula_mRNA9015 Alkaloid 7DLGT low borderline
rhynchospora_breviuscula_mRNA9018 Alkaloid 7DLGT low borderline
rhynchospora_breviuscula_mRNA9389 Alkaloid 7DLGT medium pass
rhynchospora_breviuscula_mRNA9390 Alkaloid 7DLGT low borderline
rhynchospora_breviuscula_mRNA9391 Alkaloid 7DLGT medium pass
rhynchospora_breviuscula_mRNA9392 Alkaloid 7DLGT low borderline
rhynchospora_breviuscula_mRNA9656 Alkaloid 7DLGT medium pass
rhynchospora_breviuscula_mRNA11307 Alkaloid 7DLH medium borderline
rhynchospora_breviuscula_mRNA13037 Alkaloid 7DLH medium borderline
rhynchospora_breviuscula_mRNA13881 Alkaloid 7DLH medium borderline
rhynchospora_breviuscula_mRNA13888 Alkaloid 7DLH medium borderline
rhynchospora_breviuscula_mRNA13889 Alkaloid 7DLH medium borderline
rhynchospora_breviuscula_mRNA17025 Alkaloid 7DLH low borderline
rhynchospora_breviuscula_mRNA17671 Alkaloid 7DLH medium borderline
rhynchospora_breviuscula_mRNA18009 Alkaloid 7DLH medium borderline
rhynchospora_breviuscula_mRNA7643 Alkaloid 7DLH medium borderline
rhynchospora_breviuscula_mRNA908 Alkaloid 7DLH medium borderline
rhynchospora_breviuscula_mRNA13390 Alkaloid 8HGO medium borderline
rhynchospora_breviuscula_mRNA13394 Alkaloid 8HGO low borderline
rhynchospora_breviuscula_mRNA13402 Alkaloid 8HGO medium borderline
rhynchospora_breviuscula_mRNA17297 Alkaloid 8HGO medium borderline
rhynchospora_breviuscula_mRNA17298 Alkaloid 8HGO medium borderline
rhynchospora_breviuscula_mRNA18597 Alkaloid 8HGO medium borderline
rhynchospora_breviuscula_mRNA18598 Alkaloid 8HGO medium borderline
rhynchospora_breviuscula_mRNA1871 Alkaloid 8HGO medium borderline
rhynchospora_breviuscula_mRNA19452 Alkaloid 8HGO medium borderline
rhynchospora_breviuscula_mRNA8436 Alkaloid 8HGO medium borderline
rhynchospora_breviuscula_mRNA9070 Alkaloid 8HGO medium borderline
rhynchospora_breviuscula_mRNA9460 Alkaloid ADC medium pass
rhynchospora_breviuscula_mRNA15156 Alkaloid BBE medium borderline
rhynchospora_breviuscula_mRNA15157 Alkaloid BBE medium borderline
rhynchospora_breviuscula_mRNA15161 Alkaloid BBE medium borderline
rhynchospora_breviuscula_mRNA15163 Alkaloid BBE medium borderline
rhynchospora_breviuscula_mRNA16805 Alkaloid BBE low borderline
rhynchospora_breviuscula_mRNA3649 Alkaloid BBE medium borderline
rhynchospora_breviuscula_mRNA9984 Alkaloid BBE medium borderline
rhynchospora_breviuscula_mRNA9986 Alkaloid BBE medium borderline
rhynchospora_breviuscula_mRNA10395 Alkaloid CNMT low borderline
rhynchospora_breviuscula_mRNA15323 Alkaloid CNMT medium borderline