PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

2205
Candidate Protein Records
1765
Pathway-Level Records
4100
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
SIchi04G0001250.1 Alkaloid IO medium borderline
SIchi04G0001270.1 Alkaloid IO medium borderline
SIchi06G0000990.3 Alkaloid IO medium borderline
SIchi06G0008230.1 Alkaloid IO medium borderline
SIchi06G0010110.1 Alkaloid IO medium pass
SIchi07G0000900.1 Alkaloid IO low borderline
SIchi09G0001060.1 Alkaloid IO medium borderline
SIchi14G0004260.1 Alkaloid IO medium borderline
SIchi14G0004260.2 Alkaloid IO medium borderline
SIchi15G0003020.1 Alkaloid IO medium borderline
SIchi15G0003470.1 Alkaloid IO medium borderline
SIchi15G0003520.1 Alkaloid IO medium borderline
SIchi15G0003520.2 Alkaloid IO medium borderline
SIchi15G0006650.1 Alkaloid IO medium borderline
SIchi15G0006670.1 Alkaloid IO low borderline
SIchi18G0004760.1 Alkaloid IO low borderline
SIchi19G0000080.1 Alkaloid IO medium borderline
SIchi19G0000130.1 Alkaloid IO low borderline
SIchi20G0004870.1 Alkaloid IO medium borderline
SIchi23G0001550.1 Alkaloid IO low borderline
SIchi25G0001150.1 Alkaloid IO medium pass
SIchi07G0007480.1 Alkaloid ISY medium pass
SIchi15G0005530.1 Alkaloid ISY medium pass
SIchi15G0005540.1 Alkaloid ISY high pass
SIchi15G0005540.2 Alkaloid ISY high pass
SIchi15G0005780.1 Alkaloid ISY high pass
SIchi15G0005780.2 Alkaloid ISY high pass
SIchi15G0005790.1 Alkaloid ISY medium pass
SIchi18G0003670.1 Alkaloid ISY medium pass
SIchi21G0006310.1 Alkaloid ISY medium pass
SIchi03G0003150.1 Alkaloid LAMT medium borderline
SIchi03G0008300.1 Alkaloid LAMT medium borderline
SIchi03G0008300.2 Alkaloid LAMT medium borderline
SIchi04G0003210.1 Alkaloid LAMT medium borderline
SIchi04G0003220.1 Alkaloid LAMT medium borderline
SIchi04G0003220.2 Alkaloid LAMT medium borderline
SIchi04G0003240.1 Alkaloid LAMT medium borderline
SIchi04G0003250.1 Alkaloid LAMT medium borderline
SIchi14G0004370.1 Alkaloid LAMT medium borderline
SIchi14G0004370.2 Alkaloid LAMT medium borderline
SIchi19G0007570.1 Alkaloid LAMT medium borderline
SIchi19G0007570.2 Alkaloid LAMT medium borderline
SIchi19G0007610.1 Alkaloid LAMT medium borderline
SIchi19G0007610.2 Alkaloid LAMT medium borderline
SIchi19G0007620.1 Alkaloid LAMT medium borderline
SIchi19G0007670.1 Alkaloid LAMT medium borderline
SIchi07G0009410.1 Alkaloid MPO medium pass
SIchi07G0009410.2 Alkaloid MPO medium pass
SIchi14G0007840.1 Alkaloid MPO high pass
SIchi25G0004380.1 Alkaloid MPO medium pass