PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

2205
Candidate Protein Records
1765
Pathway-Level Records
4100
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
SIchi16G0005710.9 Alkaloid NMT low borderline
SIchi17G0002720.1 Alkaloid NMT medium pass
SIchi17G0002720.2 Alkaloid NMT medium pass
SIchi17G0002720.3 Alkaloid NMT medium pass
SIchi17G0002720.4 Alkaloid NMT medium pass
SIchi17G0002720.5 Alkaloid NMT medium pass
SIchi18G0000810.1 Alkaloid NMT medium pass
SIchi19G0000770.1 Alkaloid NMT medium pass
SIchi19G0000850.1 Alkaloid NMT low borderline
SIchi19G0000850.2 Alkaloid NMT low borderline
SIchi19G0000850.3 Alkaloid NMT low borderline
SIchi19G0005320.1 Alkaloid NMT medium pass
SIchi19G0005320.2 Alkaloid NMT medium pass
SIchi19G0005320.3 Alkaloid NMT medium pass
SIchi19G0005320.4 Alkaloid NMT medium pass
SIchi19G0005590.1 Alkaloid NMT medium pass
SIchi20G0000980.1 Alkaloid NMT medium pass
SIchi20G0000980.2 Alkaloid NMT medium pass
SIchi20G0003630.1 Alkaloid NMT medium pass
SIchi21G0001820.1 Alkaloid NMT medium pass
SIchi22G0001130.1 Alkaloid NMT medium pass
SIchi22G0001130.2 Alkaloid NMT medium pass
SIchi22G0001130.3 Alkaloid NMT medium pass
SIchi22G0001130.4 Alkaloid NMT medium pass
SIchi22G0002350.1 Alkaloid NMT medium borderline
SIchi22G0002360.1 Alkaloid NMT medium borderline
SIchi22G0002390.1 Alkaloid NMT medium borderline
SIchi22G0002400.1 Alkaloid NMT low borderline
SIchi22G0002420.1 Alkaloid NMT medium borderline
SIchi22G0003330.1 Alkaloid NMT low borderline
SIchi22G0003330.2 Alkaloid NMT low borderline
SIchi23G0001690.2 Alkaloid NMT medium pass
SIchi23G0001710.1 Alkaloid NMT medium pass
SIchi23G0001730.1 Alkaloid NMT medium pass
SIchi23G0001750.1 Alkaloid NMT medium pass
SIchi23G0001760.1 Alkaloid NMT medium borderline
SIchi25G0000490.1 Alkaloid NMT medium borderline
SIchi25G0000510.1 Alkaloid NMT medium borderline
SIchi25G0000560.1 Alkaloid NMT medium borderline
SIchi25G0002250.1 Alkaloid NMT medium pass
SIchi25G0004850.1 Alkaloid NMT medium pass
SIchi26G0000540.1 Alkaloid NMT medium borderline
SIchi26G0000570.1 Alkaloid NMT medium pass
SIchi26G0001840.1 Alkaloid NMT medium borderline
SIchi26G0001880.1 Alkaloid NMT medium borderline
SIchi26G0001890.2 Alkaloid NMT medium borderline
SIchi26G0002860.1 Alkaloid NMT low borderline
SIchi26G0002860.2 Alkaloid NMT low borderline
SIchi10G0001860.1 Alkaloid ODC low borderline
SIchi01G0007840.1 Alkaloid PMT medium pass