PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

2205
Candidate Protein Records
1765
Pathway-Level Records
4100
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
SIchi22G0000070.1 Alkaloid TRI/TRII low borderline
SIchi25G0004970.1 Alkaloid TRI/TRII low borderline
SIchi05G0002630.1 Alkaloid TYDC_DDC medium borderline
SIchi05G0002670.1 Alkaloid TYDC_DDC medium borderline
SIchi05G0002830.1 Alkaloid TYDC_DDC medium borderline
SIchi21G0001500.1 Alkaloid TYDC_DDC medium borderline
SIchi21G0001510.1 Alkaloid TYDC_DDC low borderline
SIchi21G0001550.1 Alkaloid TYDC_DDC medium borderline
SIchi21G0001690.1 Alkaloid TYDC_DDC medium borderline
SIchi21G0002190.1 Alkaloid TYDC_DDC medium borderline
SIchi03G0008300.3 Alkaloid XMT_MXMT_DXMT low borderline
SIchi04G0003260.1 Alkaloid XMT_MXMT_DXMT medium borderline
SIchi04G0003260.2 Alkaloid XMT_MXMT_DXMT medium borderline
SIchi14G0001570.1 Alkaloid XMT_MXMT_DXMT medium borderline
SIchi22G0002370.1 Alkaloid XMT_MXMT_DXMT medium borderline
SIchi01G0006710.1 Flavonoid 4CL medium pass
SIchi01G0006710.2 Flavonoid 4CL medium pass
SIchi01G0006710.3 Flavonoid 4CL medium pass
SIchi01G0006710.4 Flavonoid 4CL medium pass
SIchi01G0006710.5 Flavonoid 4CL medium pass
SIchi01G0010290.1 Flavonoid 4CL low borderline
SIchi03G0005450.3 Flavonoid 4CL low borderline
SIchi03G0006830.1 Flavonoid 4CL medium pass
SIchi04G0006460.1 Flavonoid 4CL medium pass
SIchi05G0005340.1 Flavonoid 4CL medium pass
SIchi06G0009920.1 Flavonoid 4CL low borderline
SIchi06G0009920.2 Flavonoid 4CL low borderline
SIchi06G0009920.3 Flavonoid 4CL low borderline
SIchi06G0010660.1 Flavonoid 4CL low borderline
SIchi06G0010660.2 Flavonoid 4CL low borderline
SIchi06G0010890.1 Flavonoid 4CL medium pass
SIchi06G0011020.1 Flavonoid 4CL medium pass
SIchi08G0000260.1 Flavonoid 4CL low borderline
SIchi08G0005570.1 Flavonoid 4CL medium pass
SIchi08G0005570.2 Flavonoid 4CL medium pass
SIchi08G0005570.3 Flavonoid 4CL medium pass
SIchi09G0003180.1 Flavonoid 4CL low borderline
SIchi09G0003180.2 Flavonoid 4CL low borderline
SIchi09G0003180.3 Flavonoid 4CL low borderline
SIchi09G0004570.1 Flavonoid 4CL medium pass
SIchi09G0006990.1 Flavonoid 4CL medium pass
SIchi10G0005430.1 Flavonoid 4CL low borderline
SIchi10G0005430.2 Flavonoid 4CL low borderline
SIchi10G0005430.3 Flavonoid 4CL low borderline
SIchi10G0006290.1 Flavonoid 4CL low borderline
SIchi10G0006290.2 Flavonoid 4CL low borderline
SIchi10G0006290.3 Flavonoid 4CL low borderline
SIchi10G0010380.1 Flavonoid 4CL medium pass
SIchi10G0010390.1 Flavonoid 4CL medium pass
SIchi12G0008270.1 Flavonoid 4CL low borderline