PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

2205
Candidate Protein Records
1765
Pathway-Level Records
4100
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
SIchi06G0011020.1 Rosmarinic Acid 4CL medium pass
SIchi08G0000260.1 Rosmarinic Acid 4CL low borderline
SIchi08G0005570.1 Rosmarinic Acid 4CL medium pass
SIchi08G0005570.2 Rosmarinic Acid 4CL medium pass
SIchi08G0005570.3 Rosmarinic Acid 4CL medium pass
SIchi09G0003180.1 Rosmarinic Acid 4CL low borderline
SIchi09G0003180.2 Rosmarinic Acid 4CL low borderline
SIchi09G0003180.3 Rosmarinic Acid 4CL low borderline
SIchi09G0004570.1 Rosmarinic Acid 4CL medium pass
SIchi09G0006990.1 Rosmarinic Acid 4CL medium pass
SIchi10G0005430.1 Rosmarinic Acid 4CL low borderline
SIchi10G0005430.2 Rosmarinic Acid 4CL low borderline
SIchi10G0005430.3 Rosmarinic Acid 4CL low borderline
SIchi10G0006290.1 Rosmarinic Acid 4CL low borderline
SIchi10G0006290.2 Rosmarinic Acid 4CL low borderline
SIchi10G0006290.3 Rosmarinic Acid 4CL low borderline
SIchi10G0010380.1 Rosmarinic Acid 4CL medium pass
SIchi10G0010390.1 Rosmarinic Acid 4CL medium pass
SIchi12G0008270.1 Rosmarinic Acid 4CL low borderline
SIchi12G0008270.2 Rosmarinic Acid 4CL low borderline
SIchi13G0000480.1 Rosmarinic Acid 4CL low borderline
SIchi13G0008750.1 Rosmarinic Acid 4CL medium pass
SIchi13G0010850.1 Rosmarinic Acid 4CL medium pass
SIchi13G0010850.2 Rosmarinic Acid 4CL medium pass
SIchi13G0010850.3 Rosmarinic Acid 4CL medium pass
SIchi13G0010850.4 Rosmarinic Acid 4CL medium pass
SIchi14G0008190.1 Rosmarinic Acid 4CL medium pass
SIchi15G0002130.1 Rosmarinic Acid 4CL low borderline
SIchi15G0004580.1 Rosmarinic Acid 4CL medium pass
SIchi15G0004580.2 Rosmarinic Acid 4CL medium pass
SIchi15G0004580.3 Rosmarinic Acid 4CL medium pass
SIchi16G0001730.1 Rosmarinic Acid 4CL medium pass
SIchi16G0001730.2 Rosmarinic Acid 4CL medium pass
SIchi18G0003690.1 Rosmarinic Acid 4CL medium pass
SIchi18G0003700.1 Rosmarinic Acid 4CL medium pass
SIchi18G0003720.1 Rosmarinic Acid 4CL medium pass
SIchi18G0003730.1 Rosmarinic Acid 4CL medium pass
SIchi22G0005010.1 Rosmarinic Acid 4CL low borderline
SIchi22G0005010.2 Rosmarinic Acid 4CL low borderline
SIchi26G0000680.1 Rosmarinic Acid 4CL low borderline
SIchi26G0000680.2 Rosmarinic Acid 4CL low borderline
SIchi26G0000680.3 Rosmarinic Acid 4CL low borderline
SIchi26G0000680.4 Rosmarinic Acid 4CL low borderline
SIchi26G0000680.5 Rosmarinic Acid 4CL low borderline
SIchi01G0002360.1 Rosmarinic Acid C4H low borderline
SIchi01G0002630.1 Rosmarinic Acid C4H low borderline
SIchi01G0006290.1 Rosmarinic Acid C4H low borderline
SIchi01G0006290.2 Rosmarinic Acid C4H low borderline
SIchi01G0006290.3 Rosmarinic Acid C4H low borderline
SIchi01G0006290.4 Rosmarinic Acid C4H low borderline