PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

2205
Candidate Protein Records
1765
Pathway-Level Records
4100
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
SIchi13G0005200.2 Alkaloid CODM/T6ODM medium borderline
SIchi13G0005210.2 Alkaloid CODM/T6ODM medium borderline
SIchi13G0008200.1 Alkaloid CODM/T6ODM medium borderline
SIchi13G0010490.2 Alkaloid CODM/T6ODM medium borderline
SIchi14G0000120.1 Alkaloid CODM/T6ODM medium borderline
SIchi16G0003360.1 Alkaloid CODM/T6ODM medium borderline
SIchi17G0004420.1 Alkaloid CODM/T6ODM medium borderline
SIchi17G0004420.2 Alkaloid CODM/T6ODM medium borderline
SIchi17G0005280.1 Alkaloid CODM/T6ODM medium borderline
SIchi17G0005320.1 Alkaloid CODM/T6ODM medium borderline
SIchi17G0005330.1 Alkaloid CODM/T6ODM medium pass
SIchi17G0005340.1 Alkaloid CODM/T6ODM medium borderline
SIchi17G0005380.1 Alkaloid CODM/T6ODM medium pass
SIchi17G0005390.1 Alkaloid CODM/T6ODM medium borderline
SIchi17G0005400.1 Alkaloid CODM/T6ODM medium borderline
SIchi17G0005410.1 Alkaloid CODM/T6ODM medium borderline
SIchi17G0007610.1 Alkaloid CODM/T6ODM medium borderline
SIchi19G0000050.1 Alkaloid CODM/T6ODM medium borderline
SIchi19G0003510.1 Alkaloid CODM/T6ODM medium borderline
SIchi19G0003570.1 Alkaloid CODM/T6ODM medium borderline
SIchi19G0003590.1 Alkaloid CODM/T6ODM medium borderline
SIchi21G0006450.1 Alkaloid CODM/T6ODM medium borderline
SIchi24G0000130.1 Alkaloid CODM/T6ODM medium borderline
SIchi24G0000130.2 Alkaloid CODM/T6ODM medium borderline
SIchi24G0001890.1 Alkaloid CODM/T6ODM medium borderline
SIchi24G0001900.1 Alkaloid CODM/T6ODM medium borderline
SIchi25G0003900.1 Alkaloid CODM/T6ODM medium borderline
SIchi25G0003960.1 Alkaloid CODM/T6ODM medium borderline
SIchi25G0003990.1 Alkaloid CODM/T6ODM medium borderline
SIchi01G0004640.1 Alkaloid COR medium pass
SIchi01G0004640.2 Alkaloid COR medium pass
SIchi02G0000620.1 Alkaloid COR medium pass
SIchi02G0000620.2 Alkaloid COR medium pass
SIchi02G0000620.3 Alkaloid COR medium pass
SIchi02G0000620.4 Alkaloid COR medium pass
SIchi02G0000620.5 Alkaloid COR medium pass
SIchi04G0008830.1 Alkaloid COR medium pass
SIchi08G0000950.1 Alkaloid COR medium pass
SIchi08G0000950.2 Alkaloid COR medium pass
SIchi11G0001440.1 Alkaloid COR medium pass
SIchi11G0001450.1 Alkaloid COR medium pass
SIchi11G0001450.2 Alkaloid COR medium pass
SIchi12G0006770.1 Alkaloid COR medium pass
SIchi19G0002060.1 Alkaloid COR medium pass
SIchi19G0002580.1 Alkaloid COR medium pass
SIchi19G0002580.2 Alkaloid COR medium pass
SIchi19G0002590.1 Alkaloid COR medium pass
SIchi19G0002590.2 Alkaloid COR medium pass
SIchi03G0010890.1 Alkaloid CYP719 medium borderline
SIchi06G0006840.2 Alkaloid CYP719 low borderline