PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

2205
Candidate Protein Records
1765
Pathway-Level Records
4100
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
SIchi04G0001480.1 Steroid CYP90D1 low borderline
SIchi06G0008230.1 Steroid CYP90D1 low borderline
SIchi07G0000900.1 Steroid CYP90D1 medium borderline
SIchi07G0008000.1 Steroid CYP90D1 medium borderline
SIchi07G0008000.2 Steroid CYP90D1 medium borderline
SIchi07G0008010.1 Steroid CYP90D1 medium borderline
SIchi07G0008010.2 Steroid CYP90D1 medium borderline
SIchi08G0002430.1 Steroid CYP90D1 medium borderline
SIchi10G0002310.1 Steroid CYP90D1 medium borderline
SIchi10G0007770.1 Steroid CYP90D1 medium borderline
SIchi10G0007770.2 Steroid CYP90D1 medium borderline
SIchi10G0007770.3 Steroid CYP90D1 medium borderline
SIchi11G0004280.1 Steroid CYP90D1 low borderline
SIchi14G0004820.1 Steroid CYP90D1 low borderline
SIchi15G0006650.1 Steroid CYP90D1 low borderline
SIchi16G0004710.1 Steroid CYP90D1 low borderline
SIchi17G0002030.1 Steroid CYP90D1 low borderline
SIchi20G0003090.1 Steroid CYP90D1 medium borderline
SIchi20G0003090.2 Steroid CYP90D1 medium borderline
SIchi20G0003090.3 Steroid CYP90D1 medium borderline
SIchi20G0003090.4 Steroid CYP90D1 medium borderline
SIchi20G0003090.5 Steroid CYP90D1 medium borderline
SIchi26G0001680.1 Steroid CYP90D1 low borderline
SIchi07G0006860.1 Steroid DET2 medium pass
SIchi10G0001530.1 Steroid DET2 medium pass
SIchi10G0001530.2 Steroid DET2 medium pass
SIchi10G0001530.3 Steroid DET2 medium pass
SIchi11G0007960.1 Steroid DET2 low borderline
SIchi06G0007850.1 Steroid DWF1 medium pass
SIchi06G0007850.2 Steroid DWF1 medium pass
SIchi06G0007850.3 Steroid DWF1 medium pass
SIchi01G0007670.3 Steroid DWF4/CYP90B1 medium borderline
SIchi01G0008730.1 Steroid DWF4/CYP90B1 medium borderline
SIchi01G0008730.2 Steroid DWF4/CYP90B1 medium borderline
SIchi01G0008990.1 Steroid DWF4/CYP90B1 medium borderline
SIchi01G0009000.1 Steroid DWF4/CYP90B1 medium borderline
SIchi02G0002420.1 Steroid DWF4/CYP90B1 low borderline
SIchi02G0002420.2 Steroid DWF4/CYP90B1 low borderline
SIchi02G0006380.2 Steroid DWF4/CYP90B1 low borderline
SIchi02G0007600.1 Steroid DWF4/CYP90B1 low borderline
SIchi02G0009410.1 Steroid DWF4/CYP90B1 low borderline
SIchi03G0000740.1 Steroid DWF4/CYP90B1 medium borderline
SIchi03G0000740.2 Steroid DWF4/CYP90B1 medium borderline
SIchi03G0000740.3 Steroid DWF4/CYP90B1 medium borderline
SIchi03G0000740.4 Steroid DWF4/CYP90B1 medium borderline
SIchi03G0001900.1 Steroid DWF4/CYP90B1 low borderline
SIchi03G0001900.2 Steroid DWF4/CYP90B1 low borderline
SIchi03G0001900.3 Steroid DWF4/CYP90B1 low borderline
SIchi03G0001900.4 Steroid DWF4/CYP90B1 low borderline
SIchi03G0004330.1 Steroid DWF4/CYP90B1 low borderline