PlantSME Plant secondary metabolism enzyme database

Taxus chinensis (taxus_chinensis)

Imported from atlas release summary for Taxus chinensis.

3715
Candidate Protein Records
2956
Pathway-Level Records
8306
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 800 19 BAHD (289) View species results
Alkaloid pathway 738 26 7DLGT (127) View species results
Phenylpropanoid pathway 612 13 POD (199) View species results
Flavonoid pathway 372 14 UFGT (201) View species results
Rosmarinic acid pathway 258 7 C4H (132) View species results
Steroid pathway 176 15 CAS (109) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3760 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 667 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
TchiHiC_scaffold_100071710.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_100071740.1 Steroid CYP90D1 low borderline
TchiHiC_scaffold_100071790.1 Steroid CYP90D1 low borderline
TchiHiC_scaffold_100071810.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_100071820.1 Steroid CYP90D1 low borderline
TchiHiC_scaffold_100071830.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_100071840.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_100071850.1 Steroid CYP90D1 medium pass
TchiHiC_scaffold_100071860.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_100071890.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_100071960.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_100071970.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_100071980.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_100071990.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_100072000.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_100072040.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_100072100.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_100072160.1 Steroid CYP90D1 low borderline
TchiHiC_scaffold_100072180.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_100072190.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_100072210.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_100072230.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_100079750.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_10014660.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_10017030.1 Steroid CYP90D1 medium pass
TchiHiC_scaffold_10017040.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_10017060.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_10017070.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_10017090.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_10017470.1 Steroid CYP90D1 low borderline
TchiHiC_scaffold_10040900.1 Steroid CYP90D1 low borderline
TchiHiC_scaffold_110083550.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_110087410.1 Steroid CYP90D1 low borderline
TchiHiC_scaffold_110090460.1 Steroid CYP90D1 low borderline
TchiHiC_scaffold_110094480.1 Steroid CYP90D1 low borderline
TchiHiC_scaffold_110094560.1 Steroid CYP90D1 low borderline
TchiHiC_scaffold_110099780.1 Steroid CYP90D1 low borderline
TchiHiC_scaffold_110104860.1 Steroid CYP90D1 medium pass
TchiHiC_scaffold_110114340.1 Steroid CYP90D1 low borderline
TchiHiC_scaffold_110117520.1 Steroid CYP90D1 low borderline
TchiHiC_scaffold_110120150.1 Steroid CYP90D1 low borderline
TchiHiC_scaffold_110120770.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_120160510.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_120160530.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_120163750.1 Steroid CYP90D1 low borderline
TchiHiC_scaffold_120163770.1 Steroid CYP90D1 low borderline
TchiHiC_scaffold_20187480.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_20196380.1 Steroid CYP90D1 low borderline
TchiHiC_scaffold_20196420.1 Steroid CYP90D1 low borderline
TchiHiC_scaffold_30213540.1 Steroid CYP90D1 low borderline