PlantSME Plant secondary metabolism enzyme database

Taxus chinensis (taxus_chinensis)

Imported from atlas release summary for Taxus chinensis.

3715
Candidate Protein Records
2956
Pathway-Level Records
8306
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 800 19 BAHD (289) View species results
Alkaloid pathway 738 26 7DLGT (127) View species results
Phenylpropanoid pathway 612 13 POD (199) View species results
Flavonoid pathway 372 14 UFGT (201) View species results
Rosmarinic acid pathway 258 7 C4H (132) View species results
Steroid pathway 176 15 CAS (109) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3760 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 667 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
TchiHiC_scaffold_70338080.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_70340160.1 Steroid CPD/CYP90A1 low borderline
TchiHiC_scaffold_70340170.1 Steroid CPD/CYP90A1 low borderline
TchiHiC_scaffold_70340270.1 Steroid CPD/CYP90A1 low borderline
TchiHiC_scaffold_70340320.1 Steroid CPD/CYP90A1 low borderline
TchiHiC_scaffold_70345230.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_70345270.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_70350060.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_70350390.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_70350480.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_70350550.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_70350570.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_70350580.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_70350590.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_70352200.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_70352530.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_80364420.1 Steroid CPD/CYP90A1 low borderline
TchiHiC_scaffold_80366440.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_80374200.1 Steroid CPD/CYP90A1 low borderline
TchiHiC_scaffold_80403390.1 Steroid CPD/CYP90A1 low borderline
TchiHiC_scaffold_90414000.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_90414010.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_90414040.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_90414050.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_90439060.1 Steroid CPI1 high pass
TchiHiC_scaffold_100047910.1 Steroid CYP51G1 medium borderline
TchiHiC_scaffold_100067150.1 Steroid CYP51G1 medium borderline
TchiHiC_scaffold_10032110.1 Steroid CYP51G1 medium borderline
TchiHiC_scaffold_110090540.1 Steroid CYP51G1 medium borderline
TchiHiC_scaffold_120134140.1 Steroid CYP51G1 low borderline
TchiHiC_scaffold_120134240.1 Steroid CYP51G1 low borderline
TchiHiC_scaffold_30218350.1 Steroid CYP51G1 medium borderline
TchiHiC_scaffold_30222670.1 Steroid CYP51G1 medium borderline
TchiHiC_scaffold_40256100.1 Steroid CYP51G1 medium pass
TchiHiC_scaffold_40256120.1 Steroid CYP51G1 medium borderline
TchiHiC_scaffold_60321160.1 Steroid CYP51G1 medium pass
TchiHiC_scaffold_60321170.1 Steroid CYP51G1 medium borderline
TchiHiC_scaffold_60321190.1 Steroid CYP51G1 medium pass
TchiHiC_scaffold_60321200.1 Steroid CYP51G1 medium borderline
TchiHiC_scaffold_80370030.1 Steroid CYP51G1 medium borderline
TchiHiC_scaffold_90404120.1 Steroid CYP51G1 medium borderline
TchiHiC_scaffold_90412050.1 Steroid CYP51G1 medium borderline
TchiHiC_scaffold_100044790.1 Steroid CYP90D1 low borderline
TchiHiC_scaffold_100044810.1 Steroid CYP90D1 low borderline
TchiHiC_scaffold_100047120.1 Steroid CYP90D1 low borderline
TchiHiC_scaffold_100058050.1 Steroid CYP90D1 low borderline
TchiHiC_scaffold_100064170.1 Steroid CYP90D1 low borderline
TchiHiC_scaffold_100069680.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_100071030.1 Steroid CYP90D1 medium borderline
TchiHiC_scaffold_10007160.1 Steroid CYP90D1 medium borderline