PlantSME Plant secondary metabolism enzyme database

Taxus chinensis (taxus_chinensis)

Imported from atlas release summary for Taxus chinensis.

2956
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 800 19 BAHD (289) View species results
Alkaloid pathway 738 26 7DLGT (127) View species results
Phenylpropanoid pathway 612 13 POD (199) View species results
Flavonoid pathway 372 14 UFGT (201) View species results
Rosmarinic acid pathway 258 7 C4H (132) View species results
Steroid pathway 176 15 CAS (109) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3760 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 667 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
TchiHiC_scaffold_80367380.1 Rosmarinic Acid 4CL medium pass
TchiHiC_scaffold_80379180.1 Rosmarinic Acid 4CL medium pass
TchiHiC_scaffold_80379250.1 Rosmarinic Acid 4CL medium pass
TchiHiC_scaffold_80384230.1 Rosmarinic Acid 4CL medium pass
TchiHiC_scaffold_80402040.1 Rosmarinic Acid 4CL medium pass
TchiHiC_scaffold_90410150.1 Rosmarinic Acid 4CL medium pass
TchiHiC_scaffold_90410180.1 Rosmarinic Acid 4CL medium pass
TchiHiC_scaffold_90412020.1 Rosmarinic Acid 4CL medium pass
TchiHiC_scaffold_90412030.1 Rosmarinic Acid 4CL medium pass
TchiHiC_scaffold_90412040.1 Rosmarinic Acid 4CL medium pass
TchiHiC_scaffold_90412060.1 Rosmarinic Acid 4CL medium pass
TchiHiC_scaffold_90412070.1 Rosmarinic Acid 4CL medium pass
TchiHiC_scaffold_90412090.1 Rosmarinic Acid 4CL medium pass
TchiHiC_scaffold_90412140.1 Rosmarinic Acid 4CL medium pass
TchiHiC_scaffold_90412150.1 Rosmarinic Acid 4CL medium pass
TchiHiC_scaffold_90412160.1 Rosmarinic Acid 4CL medium pass
TchiHiC_scaffold_90412170.1 Rosmarinic Acid 4CL medium pass
TchiHiC_scaffold_90412180.1 Rosmarinic Acid 4CL medium pass
TchiHiC_scaffold_90412190.1 Rosmarinic Acid 4CL medium pass
TchiHiC_scaffold_90412210.1 Rosmarinic Acid 4CL medium pass
TchiHiC_scaffold_90412220.1 Rosmarinic Acid 4CL medium pass
TchiHiC_scaffold_90425060.1 Rosmarinic Acid 4CL low borderline
TchiHiC_scaffold_90428110.1 Rosmarinic Acid 4CL low borderline
TchiHiC_scaffold_90428260.1 Rosmarinic Acid 4CL low borderline
TchiHiC_scaffold_100044790.1 Rosmarinic Acid C4H medium pass
TchiHiC_scaffold_100044800.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100044810.1 Rosmarinic Acid C4H medium pass
TchiHiC_scaffold_100044870.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100044880.1 Rosmarinic Acid C4H medium pass
TchiHiC_scaffold_100044890.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100044900.1 Rosmarinic Acid C4H medium pass
TchiHiC_scaffold_100044930.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100044940.1 Rosmarinic Acid C4H medium pass
TchiHiC_scaffold_100044950.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100047120.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100047220.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100047910.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100048300.1 Rosmarinic Acid C4H medium pass
TchiHiC_scaffold_100048310.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100048380.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100048390.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100048400.1 Rosmarinic Acid C4H medium pass
TchiHiC_scaffold_100048410.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100048430.1 Rosmarinic Acid C4H medium pass
TchiHiC_scaffold_100048640.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100048660.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100048670.1 Rosmarinic Acid C4H medium pass
TchiHiC_scaffold_100048680.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100048690.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100052220.1 Rosmarinic Acid C4H low borderline