PlantSME Plant secondary metabolism enzyme database

Taxus chinensis (taxus_chinensis)

Imported from atlas release summary for Taxus chinensis.

2956
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 800 19 BAHD (289) View species results
Alkaloid pathway 738 26 7DLGT (127) View species results
Phenylpropanoid pathway 612 13 POD (199) View species results
Flavonoid pathway 372 14 UFGT (201) View species results
Rosmarinic acid pathway 258 7 C4H (132) View species results
Steroid pathway 176 15 CAS (109) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3760 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 667 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
TchiHiC_scaffold_100052230.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100052240.1 Rosmarinic Acid C4H medium pass
TchiHiC_scaffold_100052360.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100052370.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100052380.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100052420.1 Rosmarinic Acid C4H medium pass
TchiHiC_scaffold_10005330.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_10005660.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_10005690.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_10005700.1 Rosmarinic Acid C4H medium pass
TchiHiC_scaffold_10005720.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_10005730.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100058050.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100059630.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_10005970.1 Rosmarinic Acid C4H medium pass
TchiHiC_scaffold_100064050.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100064110.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100067150.1 Rosmarinic Acid C4H medium pass
TchiHiC_scaffold_100067250.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100070980.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100071350.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_10007160.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_10007180.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100071830.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100071840.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100071850.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100071860.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100071890.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100071960.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100071970.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100071980.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100071990.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100072000.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100072010.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100072100.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100072160.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100072190.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100072210.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100072230.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100072610.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100074160.1 Rosmarinic Acid C4H medium pass
TchiHiC_scaffold_100074300.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100074310.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100074600.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100074620.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100075130.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100075140.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100075150.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100075320.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_100079750.1 Rosmarinic Acid C4H low borderline