PlantSME Plant secondary metabolism enzyme database

Trema orientale (trema_orientale)

Imported from atlas release summary for Trema orientale.

1868
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 556 20 BAHD (218) View species results
Alkaloid pathway 365 25 7DLGT (96) View species results
Phenylpropanoid pathway 356 13 POD (138) View species results
Flavonoid pathway 272 13 UFGT (190) View species results
Rosmarinic acid pathway 208 7 C4H (89) View species results
Steroid pathway 111 11 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1612 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 375 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ANR
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Gene Pathway Family Confidence Status
PON49513.1[Trema Flavonoid ANR low borderline
PON55947.1[Trema Flavonoid ANR medium borderline
PON56203.1[Trema Flavonoid ANR low borderline
PON57526.1[Trema Flavonoid ANR medium borderline
PON57529.1[Trema Flavonoid ANR medium borderline
PON57532.1[Trema Flavonoid ANR medium borderline
PON58670.1[Trema Flavonoid ANR medium borderline
PON58671.1[Trema Flavonoid ANR medium borderline
PON58672.1[Trema Flavonoid ANR medium borderline
PON58673.1[Trema Flavonoid ANR medium borderline
PON58674.1[Trema Flavonoid ANR medium borderline
PON58675.1[Trema Flavonoid ANR low borderline
PON58676.1[Trema Flavonoid ANR medium borderline
PON64822.1[Trema Flavonoid ANR medium borderline
PON78722.1[Trema Flavonoid ANR medium borderline
PON79309.1[Trema Flavonoid ANR medium pass
PON82463.1[Trema Flavonoid ANR low borderline
PON84832.1[Trema Flavonoid ANR medium borderline
PON84833.1[Trema Flavonoid ANR medium borderline
PON84836.1[Trema Flavonoid ANR medium borderline
PON84837.1[Trema Flavonoid ANR medium borderline
PON84840.1[Trema Flavonoid ANR medium borderline
PON84842.1[Trema Flavonoid ANR medium borderline
PON85886.1[Trema Flavonoid ANR medium borderline
PON89150.1[Trema Flavonoid ANR medium borderline
PON95925.1[Trema Flavonoid ANR medium borderline
PON97539.1[Trema Flavonoid ANR medium borderline
PON97540.1[Trema Flavonoid ANR medium borderline
PON99282.1[Trema Flavonoid ANR low borderline
POO00229.1[Trema Flavonoid ANR medium borderline
POO00285.1[Trema Flavonoid ANR low borderline
POO01181.1[Trema Flavonoid ANR low borderline