PlantSME Plant secondary metabolism enzyme database

Trema orientale (trema_orientale)

Imported from atlas release summary for Trema orientale.

1868
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 556 20 BAHD (218) View species results
Alkaloid pathway 365 25 7DLGT (96) View species results
Phenylpropanoid pathway 356 13 POD (138) View species results
Flavonoid pathway 272 13 UFGT (190) View species results
Rosmarinic acid pathway 208 7 C4H (89) View species results
Steroid pathway 111 11 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1612 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 375 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
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Gene Pathway Family Confidence Status Best Target
PON38776.1[Trema Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PON46364.1[Trema Phenylpropanoid CAD medium pass CAD__00014__sp_Q2KNL5_CADH1_OCIBA
PON46365.1[Trema Phenylpropanoid CAD medium pass CAD__00014__sp_Q2KNL5_CADH1_OCIBA
PON49502.1[Trema Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
PON50129.1[Trema Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
PON50133.1[Trema Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
PON51936.1[Trema Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
PON53412.1[Trema Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
PON54579.1[Trema Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
PON55947.1[Trema Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PON55952.1[Trema Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
PON55954.1[Trema Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
PON56176.1[Trema Phenylpropanoid CAD low borderline CAD__00008__sp_O49482_CADH5_ARATH
PON56177.1[Trema Phenylpropanoid CAD low borderline CAD__00008__sp_O49482_CADH5_ARATH
PON56187.1[Trema Phenylpropanoid CAD low borderline CAD__00008__sp_O49482_CADH5_ARATH
PON57526.1[Trema Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PON57527.1[Trema Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PON57528.1[Trema Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PON57529.1[Trema Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PON57530.1[Trema Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PON57531.1[Trema Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PON57532.1[Trema Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PON58066.1[Trema Phenylpropanoid CAD medium pass CAD__00014__sp_Q2KNL5_CADH1_OCIBA
PON58671.1[Trema Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PON61145.1[Trema Phenylpropanoid CAD low borderline CAD__00012__sp_Q02972_CADH8_ARATH
PON64822.1[Trema Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PON64823.1[Trema Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
PON65351.1[Trema Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
PON67638.1[Trema Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
PON75441.1[Trema Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
PON82197.1[Trema Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
PON82463.1[Trema Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PON82650.1[Trema Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
PON82652.1[Trema Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
PON82654.1[Trema Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
PON82655.1[Trema Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
PON83527.1[Trema Phenylpropanoid CAD medium pass CAD__00009__sp_P42734_CADH9_ARATH
PON83983.1[Trema Phenylpropanoid CAD low borderline CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
PON84720.1[Trema Phenylpropanoid CAD low borderline CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
PON84832.1[Trema Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PON84833.1[Trema Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PON84834.1[Trema Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PON84836.1[Trema Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PON84837.1[Trema Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PON84838.1[Trema Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PON84839.1[Trema Phenylpropanoid CAD low borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PON84840.1[Trema Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PON84841.1[Trema Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PON84842.1[Trema Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PON84845.1[Trema Phenylpropanoid CAD low borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR