PlantSME Plant secondary metabolism enzyme database

Trema orientale (trema_orientale)

Imported from atlas release summary for Trema orientale.

1868
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 556 20 BAHD (218) View species results
Alkaloid pathway 365 25 7DLGT (96) View species results
Phenylpropanoid pathway 356 13 POD (138) View species results
Flavonoid pathway 272 13 UFGT (190) View species results
Rosmarinic acid pathway 208 7 C4H (89) View species results
Steroid pathway 111 11 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1612 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 375 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
PON50129.1[Trema Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
PON50133.1[Trema Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
PON51936.1[Trema Terpenoid TPS medium pass TPS__00110__sp_G0Y7D1_TPS1_LITCU
PON53412.1[Trema Terpenoid TPS medium pass TPS__00137__sp_J9RLZ7_TPS1_VALOF
PON54689.1[Trema Terpenoid TPS low borderline TPS__00023__sp_A0A1V0QSG0_TS5FN_CANSA
PON54690.1[Trema Terpenoid TPS medium pass TPS__00023__sp_A0A1V0QSG0_TS5FN_CANSA
PON55952.1[Trema Terpenoid TPS medium pass TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA
PON55953.1[Trema Terpenoid TPS medium pass TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA
PON55954.1[Trema Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
PON64823.1[Trema Terpenoid TPS medium pass TPS__00059__sp_B9RXW0_TPS7_RICCO
PON67638.1[Trema Terpenoid TPS medium pass TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA
PON75441.1[Trema Terpenoid TPS medium pass TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA
PON82650.1[Trema Terpenoid TPS medium pass TPS__00053__sp_A0A7G5KLV3_TPS4_CANOD
PON82652.1[Trema Terpenoid TPS medium pass TPS__00111__sp_G0Y7D2_TPS2_LITCU
PON82653.1[Trema Terpenoid TPS medium pass TPS__00126__sp_J7LH11_TPS8_PHYDL
PON82654.1[Trema Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
PON82655.1[Trema Terpenoid TPS medium pass TPS__00111__sp_G0Y7D2_TPS2_LITCU
PON82657.1[Trema Terpenoid TPS medium pass TPS__00125__sp_I6RE61_TPS4_MATCR
PON82658.1[Trema Terpenoid TPS medium pass TPS__00111__sp_G0Y7D2_TPS2_LITCU
PON84203.1[Trema Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
PON84631.1[Trema Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
PON85950.1[Trema Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
PON90199.1[Trema Terpenoid TPS low borderline TPS__00015__sp_A0A1L6Z3A5_TPS5_PSEAD
PON90389.1[Trema Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
PON94472.1[Trema Terpenoid TPS medium pass TPS__00023__sp_A0A1V0QSG0_TS5FN_CANSA
PON94473.1[Trema Terpenoid TPS medium pass TPS__00023__sp_A0A1V0QSG0_TS5FN_CANSA
PON95189.1[Trema Terpenoid TPS medium pass TPS__00137__sp_J9RLZ7_TPS1_VALOF
PON95190.1[Trema Terpenoid TPS medium pass TPS__00117__sp_G8H5M7_TPS9_SOLHA
PON95191.1[Trema Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
PON98843.1[Trema Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
POO03632.1[Trema Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC