PlantSME Plant secondary metabolism enzyme database

Trema orientale (trema_orientale)

Imported from atlas release summary for Trema orientale.

1868
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 556 20 BAHD (218) View species results
Alkaloid pathway 365 25 7DLGT (96) View species results
Phenylpropanoid pathway 356 13 POD (138) View species results
Flavonoid pathway 272 13 UFGT (190) View species results
Rosmarinic acid pathway 208 7 C4H (89) View species results
Steroid pathway 111 11 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1612 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 375 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
PON31558.1[Trema Alkaloid GS low borderline
PON31926.1[Trema Alkaloid GS low borderline
PON32552.1[Trema Alkaloid GS low borderline
PON39657.1[Trema Alkaloid GS low borderline
PON46364.1[Trema Alkaloid GS high pass
PON46365.1[Trema Alkaloid GS high pass
PON53207.1[Trema Alkaloid GS low borderline
PON56176.1[Trema Alkaloid GS low borderline
PON56177.1[Trema Alkaloid GS low borderline
PON56178.1[Trema Alkaloid GS low borderline
PON56179.1[Trema Alkaloid GS low borderline
PON56180.1[Trema Alkaloid GS low borderline
PON56185.1[Trema Alkaloid GS low borderline
PON56187.1[Trema Alkaloid GS low borderline
PON56393.1[Trema Alkaloid GS low borderline
PON57838.1[Trema Alkaloid GS medium pass
PON57839.1[Trema Alkaloid GS medium pass
PON58066.1[Trema Alkaloid GS high pass
PON59345.1[Trema Alkaloid GS low borderline
PON59346.1[Trema Alkaloid GS low borderline
PON83527.1[Trema Alkaloid GS high pass
PON83983.1[Trema Alkaloid GS medium pass
PON84720.1[Trema Alkaloid GS medium pass
PON92499.1[Trema Alkaloid GS low borderline
PON92783.1[Trema Alkaloid GS low borderline
PON93018.1[Trema Alkaloid GS high pass
PON93038.1[Trema Alkaloid GS high pass
PON94190.1[Trema Alkaloid GS low borderline
PON97064.1[Trema Alkaloid GS high pass
PON97067.1[Trema Alkaloid GS high pass
PON97069.1[Trema Alkaloid GS medium pass
PON97070.1[Trema Alkaloid GS low borderline
PON97072.1[Trema Alkaloid GS high pass
PON97073.1[Trema Alkaloid GS low borderline
PON97075.1[Trema Alkaloid GS high pass
PON97076.1[Trema Alkaloid GS high pass
PON97080.1[Trema Alkaloid GS high pass
PON97091.1[Trema Alkaloid GS medium pass
PON98948.1[Trema Alkaloid GS low borderline
POO03393.1[Trema Alkaloid GS low borderline
POO03673.1[Trema Alkaloid GS low borderline
POO03682.1[Trema Alkaloid GS low borderline
POO03683.1[Trema Alkaloid GS low borderline